Conserved Protein Domain Family
Csf2_U
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cd09706: Csf2_U 
CRISPR/Cas system-associated RAMP superfamily protein Csf2
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Contains several motifs similar to Cas7 family
Links
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Statistics
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PSSM-Id: 187837
Aligned: 3 rows
Threshold Bit Score: 473.674
Created: 6-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
YP_195550      7 IQGIFKLTAPMHVADSiqysld---dkgyvVRKTNGMANVIATMRQNILTDG--MRVKIPYFPANDLRGRLRRKAAALVM 81  Azoarcus sp. EbN1
YP_002425512   5 FSAFIRTRSPLHIAAPgsmrfdpatgktvyGGQSVGVPCTGIQREVLFNEAG--EAKHFPVIAANNISGRLRRHAARIIL 82  Acidithiobacill...
YP_516035     13 IRGVITLTAHTHQTSP--------------DGKTEGLTSQAKTSVISHAPGGnfLIPNIPYISMNSVRGLIRRAAGGVLM 78  Rhodoferax ferr...

YP_195550     82 EALAAKGDKVPVELYAGLCAGA---SGAKPENSvTIEEIKRASKHVYMGLFGGGTRMLRsRFI-VSDAVPIMNATvkAGL 157 Azoarcus sp. EbN1
YP_002425512  83 EAIRLRGQKVSLAVYNVLQCGAv--TGNPDGKDmTLGEYRQYRDDPYFGLFGGGPKMMR-RCLeVENALPVHADT--TAN 157 Acidithiobacill...
YP_516035     79 QELSRSKHLISRNLYLSIMRGSfsrTGINAGGA-SYQQLIAAQDNLFAGLWGGGSFMYEsKVRgERDLFPMLECT--KDL 155 Rhodoferax ferr...

YP_195550    158 VPALFGPYENRALPlsngseavesgdgYKLTEVRHIVRVDDVTRVMRSDELRAYVQDAENAVAQWQANvlqNRSDRKnQG 237 Azoarcus sp. EbN1
YP_002425512 158 LGSMAHPHAHRHAQg------------DHFTDVWGFRRNDDLRDLVNIHQAAEVVENFEAEFNARQQAi-lGEVDRE-KG 223 Acidithiobacill...
YP_516035    156 FPQRYQASCLNATP-------------NQIIEKTLIASKDDFERLPQWDVIENVEQAYEEHMASKFGA---NQAKRDqKA 219 Rhodoferax ferr...

YP_195550    238 EQKTTgeetas---ikksdLANVVSVQSIIAGTELYVRFDLQDTtTQAQRGLLLCALRDLINEQALGGWIRNGFGKFT-- 312 Azoarcus sp. EbN1
YP_002425512 224 SSKTS--------------VKTYSALEFVRPGTLFDFSILMKWAiSDAQAGLFLLTLDSLAETERLGGYGRNGFGRFSfd 289 Acidithiobacill...
YP_516035    220 TAKADgvflkdseklktndLNTFTQVEAIIPGVQLYFGMTVRDA-TDAQIGLLLAAVASWANRNALGGGAVRGRGSFT-- 296 Rhodoferax ferr...

YP_195550    313 AEHFTANLEDKAFAPFALDDKTGELKLTDAAgPML 347 Azoarcus sp. EbN1
YP_002425512 290 DAILLTSDGKEHQDAFHDGRLNREDPLVAHTlSAW 324 Acidithiobacillus ferrooxidans ATCC 23270
YP_516035    297 ASLQLFQGGDVQVDQVLVGEAPGYTSSTGVE-PYI 330 Rhodoferax ferrireducens T118
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