Conserved Protein Domain Family
Csx10
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cd09700: Csx10 
CRISPR/Cas system-associated RAMP superfamily protein Csx10
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains
Links
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Statistics
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PSSM-Id: 187831
Aligned: 4 rows
Threshold Bit Score: 507.102
Created: 6-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
YP_474347      4 IELTLTAESPLAIGRQKPGGSISEAQDFIPGSVIRGALADLLLRQsrhrpg--ealtgDLAALFTEARAAvfthayp--- 78  Synechococcus s...
NP_485518      4 IELTIKALSPLAIGKQKPGGSINEAERYIPGSVLRGAIAKHILQRagrelenlatnggDFADLFLAENPAifqnaypava 83  Nostoc sp. PCC ...
YP_001635872   4 IPYRVTLLEPLLATRIAGDPNSGVSYPYVPGSLVRGAAVAMYARNkgivav--dareeEARRLFFDGRTRyl-------- 73  Chloroflexus au...
YP_001635891   1 MWLKIKPNNPLILGDVRASSQFLSPTQYIPGRILRGAWAEWLLIQgrqdil-ptvqrvRIGNFFPTTEWRpicy------ 73  Chloroflexus au...

YP_474347     79 ---------gsgsrvLPATAFSSKNNPGFRSEag----ktGVFDTLLDRFCSQrlgipf------dpaepdGSGGRVEPF 139 Synechococcus s...
NP_485518     84 kvgskhqvvdnnikvLPATAVSSKANPGFLPKg------hGVFDTLIDSFCAEqfqhsydp--sslkaleqGVDPRVETY 155 Nostoc sp. PCC ...
YP_001635872  74 -------------naYPADASGRRTLPTPRSLfh-----vEGEESPIYDFALEvidavne-----etvqfvGAARDSQPF 130 Chloroflexus au...
YP_001635891  74 ------------alpLPLSALTCKQASGFKKEphpdnqghGVVDALIPQLAYSlleragacfaapfvltclTCGSRMEAI 141 Chloroflexus au...

YP_474347    140 GGFYSQEe---gSRYRRVAVSKRLLTRVGINRRRATAADQILYSLEVINEgragr----dgslqPSLFSGHIYLQDRELA 212 Synechococcus s...
NP_485518    156 NSLYSKHn----EQYCTHAATSRLLTRVGINRYRATSSDDILYSIEVLNEafivanegknqewdNYVYRGYINVSNDELA 231 Nostoc sp. PCC ...
YP_001635872 131 CRIDDSN-----IFFISPKRRINVHTQRDRVKGRATEVSGAVFQYDALEE--------------GQTFAGWVLVDKDDDV 191 Chloroflexus au...
YP_001635891 142 TGFYTVYrdgttERYCQSRLRYHSQTKVGISRYRRAAVEQVLYTANALSPvtvqp----dekvsDLVFLGRIYGERSDVA 217 Chloroflexus au...

YP_474347    213 AALagylntharrlSLGGGVSRGLGRVSLAARHlrapkpsLAERVAAFNQKLRQRWQQWq--vFGNPWQPLPper----- 285 Synechococcus s...
NP_485518    232 TKLtnfinnnsevfRLGGSVSRGLGKVEITAKEipv-addISSRIHVFNQALHKRWQDWse-aFGDGLRPAKsdrtpnpt 309 Nostoc sp. PCC ...
YP_001635872 192 ELLssll---rhiyRLGGSSNSGYGRVTVAVDApq---niQVWREIPKQIVPIDAGETFvvtlLSDTLVRDP-------- 257 Chloroflexus au...
YP_001635891 218 DLIeai-----nhiAIGALHTRGYGRVKAEEAEvvg-fpdIEERVRLFNEILVHCWQDLk--sLATNAEDLPakpe---- 285 Chloroflexus au...

YP_474347    286 ---qyfSIGLQSGAILKErwqrttvltPPMLQEEANCEDGslvle--lacsSYAYVSGWNAAWGLFKDVELVTTQGSVFL 360 Synechococcus s...
NP_485518    310 skrtffTLNLHSDVILTEdwqrttvisPEMLQQFADVEDPslklh--taysSYSYTSGWNSAWGLMKDVELVTNKGSVYL 387 Nostoc sp. PCC ...
YP_001635872 258 ------NTGQYTWDLRPAl--------QQLLSVEIEHIHPiageeeqrsvwRLDEVGGFNRAWGLPLPQAQAIAGGSVFV 323 Chloroflexus au...
YP_001635891 286 --gtyfSVDLLSPGVFQDsgi---palAPILRINGQALEPvww------mtRPDFAGGWSTAWGLPKPTNLAARMGSVYV 354 Chloroflexus au...

YP_474347    361 LSTTqmer-wipILAEMEYWGIGERTAEGFGQIEVCSLFHHHF 402 Synechococcus sp. JA-3-3Ab
NP_485518    388 FSTEnrql-wedALSSLELRGVGDRTCEGFGQVEICNEFHQIF 429 Nostoc sp. PCC 7120
YP_001635872 324 FRARspi--paqTIAGAEWDGIGERRAEGFGRLAFNWQTETEL 364 Chloroflexus aurantiacus J-10-fl
YP_001635891 355 YRWDgtldeiisTLQTLEEQGVGKRRDEGFGEFLVCHPFHQEV 397 Chloroflexus aurantiacus J-10-fl
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