Conserved Protein Domain Family
Cas3_I

?
cd09696: Cas3_I 
CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DNA helicase Cas3; This protein includes both DEAH and HD motifs; signature gene for Type I
Statistics
?
PSSM-Id: 187827
Aligned: 3 rows
Threshold Bit Score: 1184.82
Created: 6-Feb-2010
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
AAR33386     12 EDFESNYKLLTGNS-PFPWQRKLFTMFVDKRFPETCPVPTGLGKTSIIAIWLLAVAHHTrngtvtEFPRRLVYVVNRRTV 90   Geobacter sulfu...
CAG34915      3 LKFDEWYQGKHGYS-PFPWQLSLAERVLAGQPPESISTPTASGKTAIIAAWHYAVEIGA------KVPTRLIYIVDRRLI 75   Desulfotalea ps...
ZP_02732423   4 NEFATAFATLAGTPgPFPWQWELYKRFVAGDIPASCNLPTGLGKTSVIHVWLLALSVNN------KLPRRLVYVVNRRTV 77   Gemmata obscuri...
AAR33386     91 VDQATDEARKMLealitkpelcavad----vlsslatradaapLAISTLRGQFADNAEWRDDPARSAVIVGTVDMIGSRL 166  Geobacter sulfu...
CAG34915     76 VDSVTEYAEKIG-------------------------------CTVIKMRGGVTIDDSWMLNPHEPVVIVSTVDQAGSRL 124  Desulfotalea ps...
ZP_02732423  78 VDQTTNEVENLRerlpdvpeveaalwalcstrpekpdpkkdrpLAISTLRGQFADNREWSADPSRPAVICGTVDMIGSRL 157  Gemmata obscuri...
AAR33386    167 LFSGYGCGFKSRPLHAGFLGQDTLLVHDEAHLEPAFQELVSAIASeqQRRRDFWQLRVMELTATSRSDitDANTLFTgED 246  Geobacter sulfu...
CAG34915    125 LWRGYGVSPKSAPIHAALIGNDAMIVLDEAHISTPFAETLKQIMN--LRPPSILPWHVVTMTATPVTD--DRTMTLSaKD 200  Desulfotalea ps...
ZP_02732423 158 LFSGYGCGFKTRPLHAGFLGQDALIVHDEAHLEPAFQELLVEIEKeqQRCKDFRPLRVVELTATSRADgpPPFTLSD-ED 236  Gemmata obscuri...
AAR33386    247 RKHDVARKRLEAKKGISFHPVDDEKRVTEKVEQLTKGYKDSGQAILVFLRGVKEVMKVAAFLRKVVpdgvETLTGTLRGF 326  Geobacter sulfu...
CAG34915    201 YAHPVLKKRLASKKIVKLVKPSDEQFLSTMVKEANLLMADVKGVVAVVCNTTKHARAIFAKLPGEK----ILLTGRVRPA 276  Desulfotalea ps...
ZP_02732423 237 YKDETVQRRVGAKKALHLQPNKDEKKLADEIADLALKHKESGSAILVFVRKVDDVDKVTKKLPKGLf---EQLTGTLRGL 313  Gemmata obscuri...
AAR33386    327 ERDtlarenAVFARFMP----HSEAIPQQgTVYLVCTSAGEVGVNISADHLVCDLTPFESMMQRFGRVNRFGD-GNAHID 401  Geobacter sulfu...
CAG34915    277 DKD------EILNQYLPqmlsGSRGRGRQ-PLFVVATQTIEVGADLDFDALVTQNAPIDALQQRFGRLDRLGElQACQGA 349  Desulfotalea ps...
ZP_02732423 314 ERDdlv-kkPIFQRFLPpsnrNTTAAPQPgTVYLVCTSAGEVGVNISADHLVCDLSTFESMAQRFGRVNRFGErTDTEIH 392  Gemmata obscuri...
AAR33386    402 VVHRpfgKGSGFDESApaaldddpsagaasqddltadaapkkkekplsPFDRACAQTLSVLKQLPLRedrrrdaspaaLS 481  Geobacter sulfu...
CAG34915    350 IVYLdlgKDQDCKVYGk-------------------------------KILKSTWSWLKKIQHGKGKnkr------vdFG 392  Desulfotalea ps...
ZP_02732423 393 VVHP---READFDGEN--------------------------------TIDVRRMRTLTLLLQLNGQgsp------aaLG 431  Gemmata obscuri...
AAR33386    482 EIPLADRQAAFTPPPVILPISdILFDVWALTSVrqk-lpGRPPVADWLHGVTEWEpPATHVAWRDEVYlvsg-mleiCPP 559  Geobacter sulfu...
CAG34915    393 VLAIKKAIEASSPPMREISLP-FPLSHTDLRCLrqtmpsVDMDISPWLHGDDKDN-ITVQVVWREDLP---------CET 461  Desulfotalea ps...
ZP_02732423 432 MLDPKARQEAFAPTPTILPVSdILFDAWALTTIrak-lpGRPPVEPYLHGLAEWQpPEAHVAWREEVGcitgalltqYPP 510  Gemmata obscuri...
AAR33386    560 EDLLEDYPLKPHELLRDQTTRVFSELEKIASRCpakpvwllnadgkvdvLPLEKLVDRDKLRLADCTVLLPPAVGGLDgg 639  Geobacter sulfu...
CAG34915    462 EQWVEIVQAAPPVMAEAMPCPIYEVVRWLGRRS----------------VVVGDRVVRGDSIRGGCMIVIPTRYGGYD-- 523  Desulfotalea ps...
ZP_02732423 511 QDLLEDYPLKPHELLRDNSGRVFDRLKKLKADAgtpvwvvd-dddsvrvTTLGELIDAGKEAIERRTVLLPPGAGGLAng 589  Gemmata obscuri...
AAR33386    640 mlngdaaydpkvvydiADQWLGend--rpRRCRLWDNEGPLSGMRLVR-TIDVRPDaeeQEEESAESTIRRCWHWYVR-P 715  Geobacter sulfu...
CAG34915    524 ----------------EWGWMP-------QKCDPVKDLGNQVGAKFRLvGAGEDSDipeLLKEANAPFVKPLITFYPAgV 580  Desulfotalea ps...
ZP_02732423 590 mldat----stsaddvADRWFAdelrtrhRRIRVWDDDTVPSGMRRIRkAIDIKPD---AEEAEEEETGTRFWYWFEL-S 661  Gemmata obscuri...
AAR33386    716 RSADDDGSRTARVNQELTSHLRSAEDFAKKLVDrlglgaleAKAVVLAARWHDLGKDRLIWQRSIGNRDYPGLVLAKSGS 795  Geobacter sulfu...
CAG34915    581 IVTETPRRKRSGDEVALSDHLDNVFEVAKNFSA--------DEAVRQAARLHDIGKQDPRFQTMLGACSTPLAKSNHISP 652  Desulfotalea ps...
ZP_02732423 662 SGGDGDGSKNTTGAVLWQVHTDDVVKNTAAIVEklgl-gdlVKAFEIAAKCHDLGKRRKVFQTVLGNRAYPAVTLAKSGQ 740  Gemmata obscuri...
AAR33386    796 GMRPIDLSdYRHELGSLIDISNyp---eFLELSEELQDLVLHLVAAHHGRARPHFPEKETFDYDRseeavAAIVSEVPRR 872  Geobacter sulfu...
CAG34915    653 WAAKVARSmSGLPKGWRHEVAS------VSMLSDEVSDLLKYLVGTHHGYNRSVLSISGDFALWH-----KAGGSDWGSM 721  Desulfotalea ps...
ZP_02732423 741 KGGRIAET-YRHEFGSLIDTANpdlapgFAGLSEDLKAFVLHVIATHHGRGRPHFPEPEAFDPERpdadaKTVAREVPRR 819  Gemmata obscuri...
AAR33386    873 YGRLQRKYGRWGLAYLESLVRAADAMASQ 901  Geobacter sulfurreducens PCA
CAG34915    722 TCRLNEEYGAWQLAYLEAMVRLADWVQSK 750  Desulfotalea psychrophila LSv54
ZP_02732423 820 FAQLQRKYGRWGLAYLESLLRAADYAASA 848  Gemmata obscuriglobus UQM 2246
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap