Conserved Protein Domain Family
Csm3_III-A
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cd09683: Csm3_III-A 
CRISPR/Cas system-associated RAMP superfamily protein Csm3
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein
Links
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Statistics
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PSSM-Id: 187814
Aligned: 4 rows
Threshold Bit Score: 309.106
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
BAB64956      14 RSIIKISGKIKNETPLRIGYGKS---QSFTDPTDNPILKVNERPIIPGSSFKGALRSLAEAYVK--------SWNDPRYI 82  Sulfolobus toko...
BAB64957      13 KRQTVIEGILEVQSPLRIGVGKFggmDPASIARDTVLKDAEGTPIIPGSSWKGVFRSEGERVLKrrnl-itcSGVGRDYC 91  Sulfolobus toko...
YP_001635893   8 ASQTRIQAILVMQTALSVSSRLS---LEPTGTDMPVIKGPDGLPFIPGSSIKGVVRFQVERILRt-------WDRRPDFW 77  Chloroflexus au...
NP_485516      6 KNRLEIIGILETVTALRISAGRS---TEPIGSDLPVIKDAFGRPLIPGSSLKGALRSRLESFLRgihhdfaaNPAQETEW 82  Nostoc sp. PCC ...

BAB64956      83 VCDLDDNKCTSCNGEE------------------KYCIPCIIFGFKDLSSRVYILDAVAEEYSI------SQRTMVTINR 138 Sulfolobus toko...
BAB64957      92 LNNFRKYDDFQRSLREnyieda------lktfwnYTCLNCKLFGTMSVIGAVKFLESRAIEFKL------GTRTMVAISR 159 Sulfolobus toko...
YP_001635893  78 ACDPFDAPCIPAKKKEqllndaetdqsfaetvwkESCTACRLFGSPWFAGRVAFRDAYLLNPEDlpt-ltQIRDGVGIDR 156 Chloroflexus au...
NP_485516     83 SIPPDEMASVKERIKNltpqekea--qlheyiinNTDLVSSLFGSPWLASKFQIRDLTVSKPDDnwfgqyQERDGVAIDR 160 Nostoc sp. PCC ...

BAB64956     139 VFGGQLPGHLYTLDYVEPNSVFNFSMFLYNLnivdgeteEWRKKAVEVVrylLKTLITDGIFIGAKKSAGFGLVKLTSGE 218 Sulfolobus toko...
BAB64957     160 TEGAAARGALVQVEFVEPGSKFTFKIIGNNLp-------NYAIGYLLTI---MKNIHDGFVQIGGHKSRGFGLVKFVNLR 229 Sulfolobus toko...
YP_001635893 157 DLGTARSGIKYDFETVIPGARFGLEILAENLe-------EWEIGFLLTV---LRLWEEGGIAIGGKTTRGPGWGKLQEIK 226 Chloroflexus au...
NP_485516    161 DTETAGDGKLYDFQVVPAGTPFIFHAVIENAa-------EWELGMLMIG---LHQFQTEQIPLGGGRSRGLGVVKLIIED 230 Nostoc sp. PCC ...

BAB64956     219 IE 220 Sulfolobus tokodaii str. 7
BAB64957     230 FL 231 Sulfolobus tokodaii str. 7
YP_001635893 227 IQ 228 Chloroflexus aurantiacus J-10-fl
NP_485516    231 MK 232 Nostoc sp. PCC 7120
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