Conserved Protein Domain Family
Cas10_III

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cd09679: Cas10_III 
CRISPR/Cas system-associated protein Cas10
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family
Statistics
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PSSM-Id: 187810
Aligned: 24 rows
Threshold Bit Score: 236.578
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAL81253      220 TLLRIKIVPVQPFIANSRKQLDLWASSHLLSMLMyKALEVIVDKFGpe--hVIYPSLRDQPFFLKFylgen--------- 288  Pyrococcus fu...
YP_002831373  243 FLVGLDIVGVADYINKSRKLRDLWASSYLLSALVwYVLINIVEEFGad--vVLFPSLRFNPFFASYiynkylk------- 313  Sulfolobus is...
YP_460641     210 SLMVFSITPVQGFIARARKMRDYWTGSVLLSWLAfEGLRWVMENLGad--hILYPSLIDQPLVNNYlekewnvsgpfkpe 287  Syntrophus ac...
YP_002509260   32 SLAIFTIGPVQSFISAAKKTKEYWAGSYLLSYLIwQALKHIMEESKegensIIYPYLKNQPLYKDLrne----------- 100  Halothermothr...
BAB67074      222 LLLGLDIVGVADYINKSRKLRDLWASSYLVSALIwYVLISFVEKFGad--sVLFPSLRFNPFFATYiyhkylk------- 292  Sulfolobus to...
NP_241194       9 TLMLFSIGPVQEFIAQARKTRDLWFGSHLLSELG-KAAAFKLSKLEa---hVIFPYVENLEKLDAKe------------- 71   Bacillus halo...
NP_343138     232 FYVVIDIPGVQEIINSARKASDYWAGSWMLSMIIwLTVWQLIKEYGpd--vLLAPTTRFNPIYYAMtlnylekef----g 305  Sulfolobus so...
YP_002948509    5 QLVIFTVGPVQSFIASARKTEDFWSGSYILSYLV-REAMKTLYQADph-ceIVYPLVSKEELENPSsr------------ 70   Geobacillus s...
AAM02510      136 VTVRLRPSGGIKTWLRGRKLADSLAASWLLGYLVyRVYERLCRRLDve--rVLRPVLPGNHPFEKKpdnle--------- 204  Methanopyrus ...
ZP_02927127     7 ALIKFQIGPVQDFIAAARSTRDLWSGSYLLSWLTaAGIRHLLHKEAe----LVFPSGDNQPLLAPDfdrkdat------- 75   Verrucomicrob...
AAL81253      289 --igdeiLVANLPNKALAIVSG----KEAEKIEEEIKk------------RIRDFLLQLYREAVd---------wAVENG 341  Pyrococcus fu...
YP_002831373  314 dkensetVIHEVVNFITKYIFNn--dETYKKLGIPPYai----------iPARATLILPGIRYVertlnlrcerdQNSQN 381  Sulfolobus is...
YP_460641     288 iwnnqpnEIASLPNKFLFLIPFgkadEIAAELEKAIS-------------EKWAAVADKVAAYLidr-----ismGNDGR 349  Syntrophus ac...
YP_002509260  101 -----eiTLPTLPNRFLAILENneaeQLLEECKKMVEnklldiainlfniSKEDKIYKQLEELLei--------yWVLLP 167  Halothermothr...
BAB67074      293 -nkekdeLIKEIVNYITTYIFNg--dETYKKLGIPPYpi----------iPARATLILLGVKYV-----------SRELG 348  Sulfolobus to...
NP_241194      72 ------kEKINSPNRVMALVDTsepkAVALEVKAAVI-------------EKWMSYANGARRLLg---------rDINPA 123  Bacillus halo...
NP_343138     306 mddglkkEIEEILNTILGKLSGi--yDYTQFLKEAIIp------------ATASLILPKEQNTCsi-------klEQEIF 364  Sulfolobus so...
YP_002948509   71 -----rlHIASIPNRFTAVVEGe--aEKAKAILQETEq------------SVRNVFYDFCFQAId----------NVFPF 121  Geobacillus s...
AAM02510      205 ---pwetRGCVMPDAVELVVDGdvsaEEVARIARETVe------------DVLEDVLKRGRETPwr-------chNVSLY 262  Methanopyrus ...
ZP_02927127    76 hptsrqlRTPNLTNIFIVLTSA----DSAESLAREARqk---------ieDEWNNIATSVWEYC-----------LPRPP 131  Verrucomicrob...
AAL81253      342 VVKVDRSEKDSMl-----------------------------------KEAYLKIVREYftvsitwvslsek-------- 378  Pyrococcus fu...
YP_002831373  382 EYEKCISNYIEEkfkegwk-----------------------klvnslIEYASKNPNDYfwavfhkvmsktsvqefkenp 438  Sulfolobus is...
YP_460641     350 EHIQEMFKRQTSgfwdfqwaatrl-------------adytdkkelesLLDETQWKDQFaymeai--------------- 401  Syntrophus ac...
YP_002509260  168 LEKSKKTEIERYrsltgmepandi------------shyslvtsiieeLMGARKNIREF--------------------- 214  Halothermothr...
BAB67074      349 LKKSDISCIEKYvitrfnegwgrlidhli---tyalshtdnpfwalfnKVIEKESVKNAvkippvqlrvitlkkenev-- 423  Sulfolobus to...
NP_241194     124 LWKRQVKDLIEFhavwmdckeea--------------hyaevrqkaeeLLAARKTLRDFkpnqpshmygev--------- 180  Bacillus halo...
NP_343138     365 EYYKNAYNCIVKeiptgnvqsdickefveafniiyqsnstldnlmnviINEAEKYADKIlirpaiyivdiddirdevesd 444  Sulfolobus so...
YP_002948509  122 LLDHEKEKLKTTteaqirsfleiywvaep---ydetasfkqireraerRLGALKNEKRY--------------------- 177  Geobacillus s...
AAM02510      263 EPLEDWWERTSGrsaarvelppgliq---------vsaavvdleepddEEAYREAVRRVaslvgtraevmdargsgg--- 330  Methanopyrus ...
ZP_02927127   132 LSDAAQTYFKQTrgff----------------------------svswQVTLVEGTSDAa-------------------- 163  Verrucomicrob...
AAL81253      379 ---------------------------ediyqvtenaglSDEDVKKWLKFAEKKENsrvleriaiypllvkiLDSLGe-- 429  Pyrococcus fu...
YP_002831373  439 plllrvivteirndeknkdkepnymdfdnkyiklvsefkKCKLSRTSPATKLSNFEy--------------yKDAIGes- 503  Sulfolobus is...
YP_460641     402 ----------------------------------qpilnKKGYSSENTSRGILYST----------------SHSLVqsa 431  Syntrophus ac...
YP_002509260  215 ---------------------------------------NYIEEKGVKCYICGERTgfepgi-----mniedEKKICg-- 248  Halothermothr...
BAB67074      424 ---------------------snyeefdnryrelvsnfkRKKLSKVSPHTQLSNYNy--------------yIDSIGet- 467  Sulfolobus to...
NP_241194     181 ---------------------------kssldpgrecvlEKHQYKRYAPYGIKKDEslda---------islVKRLSfhl 224  Bacillus halo...
NP_343138     445 lrnknv-------nailnnkqfnqlvpqyifhyistklfREKVKEKYKREILPKPNwfts--------fnkeFDYINg-- 507  Sulfolobus so...
YP_002948509  178 ---------------------------------------ESVPQHGLVCTVCKEREalcle-------dideFDRYGt-- 209  Geobacillus s...
AAM02510      331 ----------------------qpcsvcgtyptvgdrefWEELSERLPPQLLKRWEg--------------gFERLCa-- 372  Methanopyrus ...
ZP_02927127   164 --------------------------------------aYKSAYESNARSLNGVRQtrefs------awaegKWKVGh-- 197  Verrucomicrob...
AAL81253      430 -rKVTEERFEKSEQLKGWKCHVCGenlaifgd--------------------mydhdnlKSLWLDEEPLCPMCLIKRYYP 488  Pyrococcus fu...
YP_002831373  504 -sRGFEYCSVCGVLPAVLILPKGDeeykefvkgim-------------geqigdeiddlKVVLSPGEKLCPWCLIKRGLG 569  Sulfolobus is...
YP_460641     432 laAEKSIRSVARTEEPGEKCQMCSefevlhskqwngevaghyadhlkefwsqlnpeqkdDVDFKENERLCSVCLIKRLAP 511  Syntrophus ac...
YP_002509260  249 --VCGLKRKFSDYLKTEFGIEIHYpsvidiat-------------------adykeelvSSLDKDELNQLLNYMDKEFGN 307  Halothermothr...
BAB67074      468 -kRGFEYCSICGVLPAMLILPKDEneykkfveehtg------------kqfnddqiealKAILSPGEKLCPWCLIKRAIG 534  Sulfolobus to...
NP_241194     225 spNTRHFPSVCDVAFSQLRRKIEKdnlltdla-------------------knyqewvwNKYPKLKKRLFSDLFDSRLFY 285  Bacillus halo...
NP_343138     508 -gKNWEYCTVCGNEPAIINFGKENddysastkceilrla-----yqnrykvtdddlkdlKVWFKPGEKLGPLCIIKRGLY 581  Sulfolobus so...
YP_002948509  210 --MKQKLERTWERCAGIYKEPEEN-----------------------------------SEQEQYVGRIKNNEFLCGICL 252  Geobacillus s...
AAM02510      373 --ACLLKRYFGTHVIRSWYLEKISwipstaevait-------------pvkvgilnrweELKDDGGFREAALGFLREVLP 437  Methanopyrus ...
ZP_02927127   198 -eKDSLTGKEESLVDDIRLLREPKklmr----------------------------eecARLFKNPDPFGAITLIKRVWH 248  Verrucomicrob...
AAL81253      489 VWIrsktg---------------------------------------qkirFESVVDVALLYKNWRKIFDEKYGKdlvsk 529  Pyrococcus fu...
YP_002831373  570 MRPevfkvlvnngdfgqeemenkrvfipsvshiasyekyealkneeskcekIRDTISLWKYYETYPEDKRCLILKdpeil 649  Sulfolobus is...
YP_460641     512 HILknsndhi----------------------------------lcnvfrsIDNVPSTTEMALHNYFQRFGITDKkdqrv 557  Syntrophus ac...
YP_002509260  308 QDYqmpelvnglvgdvks-------------------kspeekkvlkikgtYFDIEGNELKESIKVKKLLKKINKky--- 365  Halothermothr...
BAB67074      535 VRPeflrvlitsedlrsfeekdvfip--svshvafykkfeklkedniinpdKENTISLWKYYETYPIEKRGLLREnpee- 611  Sulfolobus to...
NP_241194     286 VTHikem----------------------------------------vegaYPNKNEQEQIIKLIAQKLESFYKEt---- 321  Bacillus halo...
NP_343138     582 FRLrknlekvfk------------------------------stddiaysyYKNVIQPRIKDLDECEKLKNFLNAeeldv 631  Sulfolobus so...
YP_002948509  253 GKRv-----------------------------------------------ARDYFTPIFKAAGTKFRTFPSVME----- 280  Geobacillus s...
AAM02510      438 EQLrqiahylrcvkev----------------------drageleeaakdlKRDRLEPEGLPEDVRKELHRLTPKaprld 495  Methanopyrus ...
ZP_02927127   249 LAYlr---------------------------------------------eTKNSLEPIPSVLAIAARTDESDDErni-- 281  Verrucomicrob...
AAL81253      530 arevsedfvkdnmlvdsdlyysstwesglskklknkkeideekvkevvdflnaaykeiGNPPKYYAILVMDGDDMGKVIS 609  Pyrococcus fu...
YP_002831373  650 w---------------------------------------------------fgrtrdKTLSPYYALIRADTDYLGDLLE 678  Sulfolobus is...
YP_460641     558 iaqklh-----------------------------------------kdeehvrgekiDNRDKYYALLMMDGDNMGKLIN 596  Syntrophus ac...
YP_002509260  366 ---------------------------------------------------------nLKLNKYYALLYMDGDDMGKWVS 388  Halothermothr...
BAB67074      612 -------------------------------------------------------kgwKDVSPYYALVRADTDYLGDLLE 636  Sulfolobus to...
NP_241194     322 ---------------------------------------------------------kLNSTPYYAFLVCDGDQMGKALR 344  Bacillus halo...
NP_343138     632 yetfgnpviarrlfskctev-------------edkklpciqkeygvsdvnnafidalKGYREFYAIVKADADDMTELAR 698  Sulfolobus so...
YP_002948509  281 ----------------------------------------------------------IGSGKYYAIVMMDGDNMGKWFS 302  Geobacillus s...
AAM02510      496 eelgdvedslievllcve-----------------grfwydpeapgglrelleagdleNLYTPYYALLKLDGDRMGELFS 558  Methanopyrus ...
ZP_02927127   282 -------------------------------------------------------datPAEGAYIAAIAFDGDAIGKWIS 306  Verrucomicrob...
AAL81253      610 Gevlgeistrihpni----------------------------------------------------------------- 624  Pyrococcus fu...
YP_002831373  679 Gkltpylagiidstfyggkkdgkenvenaikrylgnagegpyknvmk------lvlsnkeseakeiikeeikdeklinni 752  Sulfolobus is...
YP_460641     597 Getiascwkkimhpqiaerltgvd----------------------------------------------------fypl 624  Syntrophus ac...
YP_002509260  389 Geklk--------------------------------------------------------------------------- 393  Halothermothr...
BAB67074      637 Gkvtpylagiidssfyggereneskvknaitrylrnaakglyqevindvlkedinqakeliknaavtaeieindndieri 716  Sulfolobus to...
NP_241194     345 Nl------------------------------------------------------------------------------ 346  Bacillus halo...
NP_343138     699 Geidaekyfevlprlikegefeekesknpk-----------------------------------------nrackfliy 737  Sulfolobus so...
YP_002948509  303 Ge------------------------------------------------------------------------------ 304  Geobacillus s...
AAM02510      559 R------------------------------------------------------------------------------- 559  Methanopyrus ...
ZP_02927127   307 Grgls--------------------------------------------------------------------------- 311  Verrucomicrob...
AAL81253      625 ------rdyveipeakyysTPQVHVAISQALANFSIREVRSVVKDe---GLLIYAGGDDVLAILPVDK------------ 683  Pyrococcus fu...
YP_002831373  753 ihhikkfikknrrrdrlvlFPSWHVSISSMLNRILLMEIKLANDLd---GFVVYAGGDDLLAILPVEK------------ 817  Sulfolobus is...
YP_460641     625 yrdvwqkiygnaglnkrlvTPAIHAAISEALGDFSIYGVASIIKDh--dGRLIYAGGDDVYAFLPIGS------------ 690  Syntrophus ac...
YP_002509260  394 ---------------hremTPEFHYLISKSLTNYSLKFVKRIVEGkgrrGKLVYSGGDDVVAFVNLKN------------ 446  Halothermothr...
BAB67074      717 isdlkdflnknvdrdrlllFPSWHVSISSMLNRILLKEIQLVNALg---GFVVYAGGDDLLAILPVEN------------ 781  Sulfolobus to...
NP_241194     347 ------------------kNIEDHQAFSKKLSEFAAKARKIVTTDkrdeGELVYAGGDDVMAYLPLHR------------ 396  Bacillus halo...
NP_343138     738 tysnmtsiakvindgnilmSPTYRVALSLAMMITLLRDIKTVEVEn--yGQIIYAGGDDVVALVPIDRlidtliglernf 815  Sulfolobus so...
YP_002948509  305 -------------------NKEDYSRISQKLAHFSQEVVPNIVETdy-hGRLVYAGGDDVLAFVPVDE------------ 352  Geobacillus s...
AAM02510      560 -------------------DPETTRGASRATIEFGLKAMRIVHGHy---GVLLYCGGDDVFAALPLHT------------ 605  Methanopyrus ...
ZP_02927127   312 ---------------dtldLHRHQKAFSKALSSFALEKARKTVNQh--rGFLIYAGGDDVLALVPADK------------ 362  Verrucomicrob...
AAL81253      684 -ALEVAYKIRKEFGKSFENgsll-------------------------pgwKLSAGILIVHYKHPLYDALEKARDLLNNK 737  Pyrococcus fu...
YP_002831373  818 -ALEFVEKSRKAIAGIIRDkigefmqteskgfv-----klnnayfsllplvGRSYVIYFSHIKYPLQLVLEDSYNLLEDG 891  Sulfolobus is...
YP_460641     691 -ALPAARKIRDYYTSIFRYvsmdrtskpitekewmpergklsvnlgigneiSISAAILICHHKESLTQMIERAHQLLQSQ 769  Syntrophus ac...
YP_002509260  447 -LFEVLRELRGYFSGNVFDnqvnykasdgiir------ekgediltlgskaSVSMGICIAHYKEPLHFVIKNARAMEKKA 519  Halothermothr...
BAB67074      782 -ALQFVENSRKIVAGIEDAssykgfikin------------nsyfsqlplvGRSYILYFSHVKYPLQLALEESYNLLEEG 848  Sulfolobus to...
NP_241194     397 -CLDVAAKLQQLFGELMNEalpke-----------------------avrpTLSVGIVIAHMMEPMSEVRKLAMAAEKQA 452  Bacillus halo...
NP_343138     816 vGENGFFKVRQWYIPTFYPh-------------------------------GRSFSVRIANIADFMTNEIQMATELLNRV 864  Sulfolobus so...
YP_002948509  353 -ALKIAKELRFAFSDEKKGlgk---------------------------gaTASVGLIVAHKKAPLQLVLNEVRRLEQKA 404  Geobacillus s...
AAM02510      606 -ALDCAFELEETFRESLKKwk-----------------------------gTCSAGLAVVHHLHPLRDAIDLAYRLEKRA 655  Methanopyrus ...
ZP_02927127   363 -ALICAADLRREFQTSTAQfqdqd-----------------------gerpDASAGIVIAHVYTPLQDLIQAARTAEERA 418  Verrucomicrob...
AAL81253      738 AKnvpgkd-----tlaigLLKRSGSY 758  Pyrococcus furiosus DSM 3638
YP_002831373  892 KEr--------------iRYGNYKKD 903  Sulfolobus islandicus L.S.2.15
YP_460641     770 AKdkaern-----acaieLRKRHGGS 790  Syntrophus aciditrophicus SB
YP_002509260  520 KKhiisgnrk-knafaigLIKHSGET 544  Halothermothrix orenii H 168
BAB67074      849 KEr--------------vKYDKYKKD 860  Sulfolobus tokodaii str. 7
NP_241194     453 KRkrne--------laifFQKRSGGD 470  Bacillus halodurans C-125
NP_343138     865 KKvkwe--------fpngEEKRSKFS 882  Sulfolobus solfataricus P2
YP_002948509  405 KSyysettrqqkdalaiaVHTHSGEI 430  Geobacillus sp. WCH70
AAM02510      656 KEagrnr-------lavgLYRRNAPE 674  Methanopyrus kandleri AV19
ZP_02927127   419 KNvvgrk------afsvtLMKRSGEI 438  Verrucomicrobium spinosum DSM 4136
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