Conserved Protein Domain Family
Csb1_I-U
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cd09678: Csb1_I-U 
CRISPR/Cas system-associated protein Csb1
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Contains several motifs similar to Cas7 family; also known as GSU0053 family
Links
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Statistics
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PSSM-Id: 187809
Aligned: 4 rows
Threshold Bit Score: 228.685
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AAR33388     18 AALVIREQLMPVEGRDgVLFPATFADTG-----YNIDKFDDGGNVCLIDSVGSQANRIEPIFMTKdy------agLVPQI 86  Geobacter sulfur...
CAG34918      4 VAISIKANLKNVNGSD-HIYPPTFAGVGhn--fVALDKGTGKAKAVQVDSVGSFANRIEAELAALg---------ILPEI 71  Desulfotalea psy...
ZP_02732421  17 AALVIREWLMPAEGADgVLFPATFAPGGnfpggYNIDTDPSGKNVCLIDSVGSQANRIEPMFMPDkcdg--kyahLVPQI 94  Gemmata obscurig...
ZP_02929517   3 LAALKNHPRLLLEAALkPVQGSRFQPTGfpdlgAATFDGPERTKMLLVESAQSVANRLEAVCWDTgnnnwvaplkGLPAV 82  Verrucomicrobium...

AAR33388     87 VVQAGNKK--VNLLEAGHRAGDAIIRCSELQQTLRAAFNN------VLNGNAEPLARIAPTSLVFGvWDSRDT----QAK 154 Geobacter sulfur...
CAG34918     72 TTSVANQT--LSVNELPHRIYDAILRDSFLGEDSWRNSDIghqllsSTTKNATALLLMLHDTSLGG-WDSHAGksvkGVK 148 Desulfotalea psy...
ZP_02732421  95 VVKAGEKE--VSILEAGHRAGDAIVRCSSLQRELHDAFND------VLKGDATKLAKIAPTSLVFGvWDSRDT----QAK 162 Gemmata obscurig...
ZP_02929517  83 LVNDKDGKplTNSVLEAHRLNSPYITTTEGFGEIKQAIAFdasrplNLASLVKALLKYDPNSLLHGiFLEKVAg---VIR 159 Verrucomicrobium...

AAR33388    155 LPRLVASTIRAYNVRPLTRSA 175 Geobacter sulfurreducens PCA
CAG34918    149 ISRSVSCEIWGYDVFVAQHTS 169 Desulfotalea psychrophila LSv54
ZP_02732421 163 LPRVVASTVRAEQVRPLTRGA 183 Gemmata obscuriglobus UQM 2246
ZP_02929517 160 LPRALTGFIEAKDVATVASGG 180 Verrucomicrobium spinosum DSM 4136
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