Conserved Protein Domain Family
Csy2_I-F
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cd09676: Csy2_I-F 
CRISPR/Cas system-associated RAMP superfamily protein Csy2
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog
Links
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Statistics
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PSSM-Id: 187807
Aligned: 6 rows
Threshold Bit Score: 377.581
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AAK02390       7 YILFDHIKVQSANAISGpLSYGFPALTGLTGAMHALNRKLTHH----PVQFGGVMVACHDYELQTYQnsaFSDRTFKQTR 82  Pasteurella mul...
CAG76580       4 LIILRRIQVENANAIAG-LTYGFPAITHFLGFTHALSRKLQASh---GLTLEGCGVVSHQHQLHAYGs--SWERSFALTR 77  Pectobacterium ...
AAQ59427      12 LLILPRLRVQNANALSSpHTWGFPALSAFTGLMTALERKLGADs---ELAFHGVGVICHGYQAHTNG---DYIQRFNLSR 85  Chromobacterium...
CAG69249       4 YAVIPRIRVQNANMQSNgLLLGGVPLFAANMFAHHLARQLGTTde-gIIYIHHNQQRLGGQAYGRFTpaqRRGAVFIGKK 82  Acinetobacter s...
YP_001209097  17 FLLIKRLEVINANALSSpLTYGFPAITAFTGAVHALSRKINRSealaDIFLDGVLIAAHSCQPQTYReyfNKPFTFIQSR 96  Dichelobacter n...
NP_669042      4 LIVLHQVRVENANAIAG-LTYGFPAITHFLGYSHALSRKLQSSh---GLTLRGCAVICHYQQVHAYLs--GWDYVFSLTR 77  Yersinia pestis...

AAK02390      83 NPIKRNGETASIIEEGKIHLDLSLVVEVHVqddrvfealtdktsqasqdflqtCKNLLWQQRIAGGSVLeignvqlfn-- 160 Pasteurella mul...
CAG76580      78 NPLTKEAKTAAFNEEGRMHMTVSLLIRCDGqipadt-----------talcehLKQQAQCQRLAGGTVIdiervtvqslp 146 Pectobacterium ...
AAQ59427      86 NPVDKDGGTAAIVEEGRIHLDLTLVFGVSGnalaqndd-------alaeraaaISRALETMRVAGGTLIpppaghyapkp 158 Chromobacterium...
CAG69249      83 DYSSKNKYALSLQPTASCHLEFSLVIKFSSsris----------------pekLTHILKRSRFAGGQIIefleittha-- 144 Acinetobacter s...
YP_001209097  97 HPVEKTGDTAPIIQEGYCHLTVSLLIGVYAkdgylsee-------qiealkkqLFIAIQQQPLAGGNVIgldaqepiqf- 168 Dichelobacter n...
NP_669042     78 NPLTKEAKTAAFNEEGRMHMTVSLVIECDGtiangddg--------analekhLASLCLTQRLAGGTITnirrvkvinyp 149 Yersinia pestis...

AAK02390     161 ------------leedqdiplALMPAFVLMDAKQELANITEELKTglrigqldeegnvqksclpscpeatALDALLEMAT 228 Pasteurella mul...
CAG76580     147 ----------vdeaetrgvmrRLLPGFVLRDRTSLLHRHFQTLQQakp-------------------qaeMIDAWLDFAA 197 Pectobacterium ...
AAQ59427     159 qlitlpegederaarfralrrRWLPGFALVARDDLLSGHHARLREtap-------------------gatLLDAWLDKSR 219 Chromobacterium...
CAG69249     145 ------------eneleaalkKIKTGFAILDRQDLLIEYQQRQQIn------------------------RVQAFTQLLA 188 Acinetobacter s...
YP_001209097 169 -----------ykddvdqcvsELLPAFVLIDAHKELTAITQELQKdnp-------------------aatALDALIETAS 218 Dichelobacter n...
NP_669042    150 ----------etevatrrllcRLLPGFALLDRSELLAEHLNRLRQtnp-------------------qaeMLDAWLDFSA 200 Yersinia pestis...

AAK02390     229 VHHIPEHANATasawqty------svkkgrGWLVPLPVGYQAISPLFAPGQLQHCRTQQYPSQYVETLYSLGKWVFPLSL 302 Pasteurella mul...
CAG76580     198 LKMQAERDPSDetvqwky-----lpkpgdgGFLTPLMIGYRAISPLYAPGEVDKTRDPHTPFCFAEAAYGIGEWQGAHRI 272 Pectobacterium ...
AAQ59427     220 LNHWPEAGDGGqtiwrh-------srqqgeGWIVPIPVGYGALSELYPAGSVANARDAAAPFRFVESLYSLGEWISPHRL 292 Chromobacterium...
CAG69249     189 LKVDTLRAFFNdqnlsw-------isatnlGYALLEPLTDQRAGIRQAQDQETTAHAYAEPLTGIVQYFSLGEILRKNTE 261 Acinetobacter s...
YP_001209097 219 LHHIPSDEQENnweiys--------vkkgrGWLVPIPIGYQGISPQYDAGVMKNARNPHYPSQYVEALYSLGKWVFPYSI 290 Dichelobacter n...
NP_669042    201 LKIQAIPPQSDtpvesgapapwgyvgkpaaGYLVPIVTGYRAISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRI 280 Yersinia pestis...

AAK02390     303 PENLs-----QCFWRYt-APQNNLYLIS 324 Pasteurella multocida subsp. multocida str. Pm70
CAG76580     273 SDIS------QILWEY--DYQNGDYHCR 292 Pectobacterium atrosepticum SCRI1043
AAQ59427     293 QDAA------DLLWYPayDAELGVYRCR 314 Chromobacterium violaceum ATCC 12472
CAG69249     262 VEDDswhnlqKLLWTYh-WSQDDIFLLK 288 Acinetobacter sp. ADP1
YP_001209097 291 DLID------NAMWYQkyDAEKDLYLVT 312 Dichelobacter nodosus VCS1703A
NP_669042    281 TDLR------QLLWGY--HQEGDNYLCR 300 Yersinia pestis KIM
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