Conserved Protein Domain Family
Csb2_I-U
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cd09667: Csb2_I-U 
CRISPR/Cas system-associated protein Csb2
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains; also known as GSU0054 family
Links
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Statistics
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PSSM-Id: 187798
Aligned: 4 rows
Threshold Bit Score: 482.836
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AAR33389           74 GILSASPYRLSVPNNAMDIVArawgrgnetnsgdANPATHRTMKSIRPIHL-----IDSSSVHYLWrvsePVAPEIADYv 148 Geobacter ...
ZP_02732420         6 GVPSGVKYRLYVPDNVADKVAkawsg----gntsASIADSRTEKDVRPTHLig-ksDELPAVNYLYpi-gDTDSEFATHk 79  Gemmata ob...
REF_jgi:Plim_3150  74 SRLSVTPYRMYVPNNTADLAAssws------rgaTDTITARVEKDIRPLHLirpadLTEPVLHYLY----DIGEAPFPYl 143 Planctomyc...
ZP_06886665        65 PAREGAGFVNFVPNNDLDAVDgd----------pTRVGELRVGKTIKPRYF-----DADAPLHYLW----AFDENPAHAl 125 Methylosin...

AAR33389          149 h-aIVEMAQNINVLGWGIDMVVGNGAMLTEEQMESLPGERWl--PHAETGVDGLRVPVNGTLADLQARHEGFLSRL---- 221 Geobacter ...
ZP_02732420        80 e-tLVTAARSVTHLGWGVDMVAGDARVLSEEEAANLTGEHWr--PAAGASTTQLRAPRAGTLNALAQKHEAFLNRL---- 152 Gemmata ob...
REF_jgi:Plim_3150 144 e-iLGRLARSITHLGWGIDQAFGNATLHATMPASQAGEELWl--PVIDPTATQLRVPIKGSLLALSAKHGAFLNRL---- 216 Planctomyc...
ZP_06886665       126 aaqIGSIAERLYQLGRGVDMAHAQAVILDDEATHRLDLEGRahyPAPTRGALPLACPTNGSLDSLMLRHEAFRHRFldav 205 Methylosin...

AAR33389          222 -----AHGIFT-PPPPLAVYDKINYRraidpppraiaAFSLLKTDas------gFRAFdTARWALTVAGMTRHAARRAAq 289 Geobacter ...
ZP_02732420       153 -----SADGFK-PVPPLTVFDTVGYRrdtepaarewvAFRITSVDpd-----apNPSFdAPAKCRDVAAWVRHATGEVCr 221 Gemmata ob...
REF_jgi:Plim_3150 217 -----KQDLFH-PVPPLTAFQLKGYRpdslrqaqpfaAFQILTIDgs------rMRLFdTTQKSLVVAGMLRHLAGQAAq 284 Planctomyc...
ZP_06886665       206 gagkrSAGGRVfAQPPKPLIRIIGYDs----------PARLLLYDirrieveksDPLF-APQPLTKTATLVVTLRDAAAa 274 Methylosin...

AAR33389          290 g-agWKESRINGCILGHGEsigd-----ekhLPTGPQ-----------RFAYLPVPSLEA-RGAGkapvigSVRRVIITA 351 Geobacter ...
ZP_02732420       222 ---nWPFSDFASFVHGHTEs----------gLQTKGEra-------deRFMYLPLPSIER-RGDRreh-vgAIRRVLVAA 279 Gemmata ob...
REF_jgi:Plim_3150 285 e-srWSDAKISSVIFGHATlrnsngnqerhvHQHNPQrqesqdivgpdRLAYLPLPSIEF-RGQGls--vgSVRRVLITT 360 Planctomyc...
ZP_06886665       275 rlcrALPPPRAALVEPVFVg----------rGATDADkt--------sRIRIIPLPSVGFvHADR------AIRRVLVAV 330 Methylosin...

AAR33389          352 FDGacGDEIDWARRALSGQMLEKIKKDEsddkehvALLSLLPGSDK-VIRSYL----RPSSSWATVTPVVLPGYDDPAHy 426 Geobacter ...
ZP_02732420       280 PPGf-GERIEWIRRRLPGQELVWDNRAQ-------GLLNALPDSDW-VLRRYT----ENAQTWSTVTPVIWPGHDDHDPe 346 Gemmata ob...
REF_jgi:Plim_3150 361 FGQgcFEEVAWTRRALNGRDLISEHNGHa-----tGMMASIPNSEK-MVQRYT----NAANTWATVTPVILPGRDDRNPr 430 Planctomyc...
ZP_06886665       331 PANc-PLPVDDIEWAFSGRDEAKGAPDKg------MSWSLVPASDRtMLRRYAaegeKAASVWRSVTPAALPVGRRWGRg 403 Methylosin...

AAR33389          427 rrrlqhvtnsdeqkrllwhlheRIDGLLRKAIVQAQFPEILakn-alIEWRKVGYWRGADLADRYGVPDhlkkfpRYHVK 505 Geobacter ...
ZP_02732420       347 ----------------------KAARLLRKAFVDAGFARAVvdaiteLDWRPVGFRAGAELASRYALPDrln-grRYHVR 403 Gemmata ob...
REF_jgi:Plim_3150 431 ----------------------KAEKLIRKALLQAGFTEFLaqn-aeLELRNVSFWPGSDLASHFRVPKhleaypRYHVR 487 Planctomyc...
ZP_06886665       404 ggf----------------arsEAEAAAAHAVRDALRHEGVhetalaIRVQREPFDANGARAENFAGARfep-aqLWHVE 466 Methylosin...

AAR33389          506 IQWRNdcqmPVRidGPICIGGGRFYGLG 533 Geobacter sulfurreducens PCA
ZP_02732420       404 VRFAH----PVR--GPLAVGAGRYRGLG 425 Gemmata obscuriglobus UQM 2246
REF_jgi:Plim_3150 488 LKWPAlgqePLKlpGVLCIGGGRHYGLG 515 Planctomyces limnophilus DSM 3776
ZP_06886665       467 ITFAA----PVF--GPLVIGDGRWLGLG 488 Methylosinus trichosporium OB3b
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