Conserved Protein Domain Family
Cmr6_III-B

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cd09661: Cmr6_III-B 
CRISPR/Cas system-associated RAMP superfamily protein Cmr6
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex
Statistics
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PSSM-Id: 187792
Aligned: 10 rows
Threshold Bit Score: 210.703
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM02509  458 ARSDEIRGYVGSYLKTLRELGrsphl--------------rvrevELRFpHSRLVVGMGGPH------------------ 505 Methanopyrus kandl...
NP_070686  69 NFLNSVLRRSLDEYRVFFENYerlfns------------fsskifSMRT-KSRLVVGLGDES------------------ 117 Archaeoglobus fulg...
NP_241198  50 SWYKQRYAAYEGHIKSSSDTNts---------------------fFLKS-SFPLIIGQGNPS------------------ 89  Bacillus haloduran...
NP_213261 106 GKLKEKLKNFSEILKRKNREIaqsllnqgyv-----nvfnedeflKLKT-AERLIVGLGTTH------------------ 161 Aquifex aeolicus VF5
NP_578853  69 KETIEKSLPIETKVKLPQKAYelykkyyqdyt--dmlnslhaitgKFKT-QSRLVVGLGDES------------------ 127 Pyrococcus furiosu...
NP_624147  47 RKNIFLNSLTRYSIKGIDIVNlfsrvnlqiedlskqgyqpilrqyKITT-ASRLVIGLGAEH------------------ 107 Thermoanaerobacter...
NP_229588  44 EKLQSDFGKISSILKERREQLikkrk--------------pfinlKMRV-KGKLLLGAGNPS------------------ 90  Thermotoga maritim...
NP_342942  37 MENLVNFTPRYNLIKSYLDDVeraldrs----------glcyvkiTFIT-LSKLLTGWSPIYf----------------- 88  Sulfolobus solfata...
NP_906057  25 NFSTFNKGKNDKLIKGATLPPcdkendi-----------kdvtgfELKTcYPGLLCGVGYHHeinkpadekgkkvegdke 93  Porphyromonas ging...
NP_377964  98 IMYNPGFEIVNKMMEEIKSALremny--------------kfievRIKT-SSKTLVGVSTNFgy---------------- 146 Sulfolobus tokodai...
AAM02509  506 -----PAENDLTLDPVTGLPVIPGTTLKGVARAAGELilergdpdelrky------------------------------ 550 Methanopyrus kandl...
NP_070686 118 -----VYETSIRLHRNYGVPYIPGSALKGVAKHYAFSilarengdeilriyesvkedlkariakrdkikkndvpedyylt 192 Archaeoglobus fulg...
NP_241198  90 -----ILETHLTLHPIYGIPYLPGSLIKGVTAHYCHQvlgkedsk----------------------------------- 129 Bacillus haloduran...
NP_213261 162 -----VFETGLALHHLFGIPYIPSSSLKGIVRMAHFWeiveeniknikedkkddvikr---------------------- 214 Aquifex aeolicus VF5
NP_578853 128 -----VYETSIRLLRNYGVPYIPGSAIKGVTRHLTYYvlaefinegndfykraktvqdafmkgdpkeil----------- 191 Pyrococcus furiosu...
NP_624147 108 -----PLETSLTIHHIFGIPYIPGTALKGVCRMVSFWdiaieeargeeieegeienlqkel------------------- 163 Thermoanaerobacter...
NP_229588  91 -----SIEVGITLSRNYGLPIIPGTAVKGAFASFLFEferd--------------------------------------- 126 Thermotoga maritim...
NP_342942  89 -----ITEVPLAWDMILDTPYIAGSEIKGIVKNYFKEvtsn--------------------------------------- 124 Sulfolobus solfata...
NP_906057  94 ddapeVYNLGMYFDYTSGLPVIPGSSIKGMLRSAIEEwdfladyel---------------------------------- 139 Porphyromonas ging...
NP_377964 147 ----tIFENGISFDPYLNVPYIPASEIKGLLRSMTDDek----------------------------------------- 181 Sulfolobus tokodai...
AAM02509  551 ----------------------fgaddtrqarkrFREVFGSKPResepkesddgnaseskrAGEVTFHDALPDPDwlrdv 608 Methanopyrus kandl...
NP_070686 193 aaviqelfekkfdelgairntrveigdtvisvgdIVKIFGTQKE-----------------EGSVIFFDAFPTPEqlk-d 254 Archaeoglobus fulg...
NP_241198 130 ---------------------------fkqgeeyALVLFGSQEQ-----------------AGAIHYHDALPTPKsi--- 162 Bacillus haloduran...
NP_213261 215 --------------lqeklqkgdirkeqnkefliHMLLFGTQKF-----------------KGLLTFLDAYPMIDesn-k 262 Aquifex aeolicus VF5
NP_578853 192 ---snakvpercsrlckeflrifgekkvpeiideLIRIFGTQKK-----------------EGEVVFFDAIPIAEeia-d 250 Pyrococcus furiosu...
NP_624147 164 -----------yeglifdrsssdkgkedspkrvlHKLLFGTQDF-----------------KGLLLFLDAFPVINnn--- 212 Thermoanaerobacter...
NP_229588 127 ------------------------------kyesLAHIFGDTER-----------------EGDLIFLDAIPVSDl---- 155 Thermotoga maritim...
NP_342942 125 -------------------------------dkvESCLYGDEGK-----------------MGKVIFFNAYPIDGk---- 152 Sulfolobus solfata...
NP_906057 140 -------------------------nngvtreeiIEKVFVGKEYs---------------iYDRDIFLDAIPIRVdn--- 176 Porphyromonas ging...
NP_377964 182 ---------------------------------lADKLFGSEES-----------------EGILMITDSYPIQAeg--- 208 Sulfolobus tokodai...
AAM02509  609 dsPLEVDVLNPHYGEYYegegp----phesmRPKPVEFLTVRRGSRWRTVLVSERrg----------------------- 661 Methanopyrus kandl...
NP_070686 255 kpNLELDIMNPHYQPYYqhgep----pgdwhSPNPIFFLTVPAGVEFTFAVASRDld----------------------- 307 Archaeoglobus fulg...
NP_241198 163 knCLSLDVITPHHQSYNqglnqa---prdddSPVPVPFLTVKADFRVILSCEDLAya----------------------- 216 Bacillus haloduran...
NP_213261 263 nkIFDLDLINVHYKSYYtqnkp----pgdweNPNPVYFLTVSKGIEFHFWVLFDSyraeklkkyndfenvinelldnnye 338 Aquifex aeolicus VF5
NP_578853 251 kpILELDIMNPHYGPYYqsgeknvpppgdwyDPIPIFFLTVPKDVPFLVAVGGRDre----------------------- 307 Pyrococcus furiosu...
NP_624147 213 vsLFDVDIINVHYKSYYgddtgkt-apgdweNPIPIPFLTVKENTSFQFSVLFDRvrfeelikekip---pevkgaidfl 288 Thermoanaerobacter...
NP_229588 156 --KFSLDIVNPHFQPYYmkeklp---pndwyDPVPIKYLVVSSGVFWFTVLESRSgv----------------------- 207 Thermotoga maritim...
NP_342942 153 -nVLTYDIITPHYNGAKdey---------nvKPIPIKFLAINKGITFKTYLAFDNkeln--------------------e 202 Sulfolobus solfata...
NP_906057 177 -tLFGEDYITHHPNPLQ--------------NPNPVRFLRVEPGVTYQFRFILKDhge---------------------k 220 Porphyromonas ging...
NP_377964 209 -sIFLPDIITPHYVNAEdes---------rvQPKPSIRFVIAPKVTFDFFIYYKNldt---------------------- 256 Sulfolobus tokodai...
AAM02509  662 -sLDVALRLLK----YGVERlGIGARTCAGYGYGE 691 Methanopyrus kandleri AV19
NP_070686 308 dlAEKAEKLLK----EALKKfGVGAKTSLGYGRFD 338 Archaeoglobus fulgidus DSM 4304
NP_241198 217 ewLNIAQKIVS----HAVTEmGIGGKTNAGYGKME 247 Bacillus halodurans C-125
NP_213261 339 nlRNKLKELLE----DTLTLyGVGAKTRLDYGIFD 369 Aquifex aeolicus VF5
NP_578853 308 -lTEKAFSLVK----LALRDlGVGAKTSLGYGRLV 337 Pyrococcus furiosus DSM 3638
NP_624147 289 ndCTRLQKLVEnwikKALTEfGIGAKTRLGYGYFK 323 Thermoanaerobacter tengcongensis MB4
NP_229588 208 -iGNSEKELIKqrfvEMLKAyGLGAKTSYGYGRFE 241 Thermotoga maritima MSB8
NP_342942 203 cgKDSLYLLLKt--mIFSMRiGWGRKVTRGYGSLD 235 Sulfolobus solfataricus P2
NP_906057 221 ltVDFRTKLFK----AIICTfGLGAKTNVGYGQFV 251 Porphyromonas gingivalis W83
NP_377964 257 ylRKVLEQLII----KMIKE-GIGSKTSLGYSLFT 286 Sulfolobus tokodaii str. 7
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