2OEB


Conserved Protein Domain Family
Cmr5_III-B
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cd09654: Cmr5_III-B 
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CRISPR/Cas system-associated protein Cmr5
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; signature gene for subtype III-B
Links
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Statistics
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PSSM-Id: 187785
Aligned: 8 rows
Threshold Bit Score: 98.6964
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2OEB_A      7 EQERASFAFKVVSDIKDKysqnkkvQGKYSSYAEKAPTIILNNGLGATLAFFLSKLEKpiddvdyksinp-------esf 79  Archaeoglobus fulg...
P58011     14 SLELAKLAMNLVEEVEKDk------RDDYLRDVKGLGSMIVQNGLMGTILFLKKKGKN---------------------- 65  Thermotoga maritima
NP_377962   1 MVEGVKLAISIFPKVILQlkd-netLKLFRSRCRDFPEETLNSGFVPTFLFYLSKSDLctlvkfvnylnnggs-dikign 78  Sulfolobus tokodai...
NP_343388   6 EEKDYKLAIEAFNLVYNAldk--kaREKFRSRARDMVEEIYTSGFIPTLFYIISKAGLennndkltallnsps-sksidl 82  Sulfolobus solfata...
Q8U1T0     19 EQRRGEYAYYVIKEVADLndk--qlEEKYASLVKKAPVMILSNGLLQTLAFLLAKAETspekanqilsrvneypprfiek 96  Pyrococcus furiosus
O66705      5 IQKVVKFAYGCVNEVKGReq----iEEKYASYVRKLPSMIIHNGLLPTVAFIRSKAGIdaqnkls--------------- 65  Aquifex aeolicus
Q8R6Z8     11 EQERASFCLKEIEELPKGkd----kRDKYKTNARRLPAFIVSNGLIPTLAFYKSKEETk--------------------- 65  Caldanaerobacter s...
Q9RC62      5 DAHYANIALQSIQELEKSde---afKTSFGSLCHQFPSMVRLNGLRLTVAFYESKKEN---------------------- 59  Bacillus halodurans

2OEB_A     80 gnaeniayaFLYKHLSTWLAegngkdsa-----------fsgltngeDPLKYIMek---tAIDVAISTEEALSILNWIKK 145 Archaeoglobus fulg...
P58011     66 ---------KVVDHLGKMIEhlt---------------------ledGIVERLMenefldARTYLKAQIAALECAKWLKR 115 Thermotoga maritima
NP_377962  79 lrstetsytVYSALILYFLTneelkekflkeinldelcpknnvtqsaNALMHLLnn---lYSNSSIVTLLMKDYLLTLKR 155 Sulfolobus tokodai...
NP_343388  83 gssdeasymAYLFVILYYLSerniinke------------flinklkNNRLELIdk---lYELSPIISARIKRYLMAIKR 147 Sulfolobus solfata...
Q8U1T0     97 lgndkdehlLLYLHIVYWLRenv---------------------drnIDVKTLLsq---dYSKVLWATKEAIALLNWMRR 152 Pyrococcus furiosus
O66705     66 --pekeawkKIENHIKNYLIkienv------------------evpdSLTRLFAem---dFSRYRLYTQKILFFTQWLKR 122 Aquifex aeolicus
Q8R6Z8     66 ---------PVYDTLNKWLQkrgyi------------------senkDALDELVdk---dFQILRLATTEILALANWLKR 115 Caldanaerobacter s...
Q9RC62     60 ---------TAHARYLAGLKaal---------------------gvsISANDIPe----rGAEYRRMTEQALRASIWFKR 105 Bacillus halodurans

2OEB_A    146 FAKAMLEE 153 Archaeoglobus fulgidus DSM 4304
P58011    116 CGEVLLGG 123 Thermotoga maritima
NP_377962 156 LAEALINV 163 Sulfolobus tokodaii str. 7
NP_343388 148 LAEALIEV 155 Sulfolobus solfataricus P2
Q8U1T0    153 FAVAMLKE 160 Pyrococcus furiosus
O66705    123 VAEGELKS 130 Aquifex aeolicus
Q8R6Z8    116 TVEIEIKE 123 Caldanaerobacter subterraneus subsp. tengcongensis
Q9RC62    106 YAEAILKC 113 Bacillus halodurans
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