Conserved Protein Domain Family
Cas5_I-E
?
cd09645: Cas5_I-E 
CRISPR/Cas system-associated RAMP superfamily protein Cas5
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex
Links
?
Statistics
?
PSSM-Id: 187776
Aligned: 70 rows
Threshold Bit Score: 103.39
Created: 11-Jan-2011
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q46898        5 LILRLAGPmqAWGQPTFEgTRPTGRFPTRSGLLGLLGACLGiqrDDTSSLQALSESvqfavrcdelilddrrvsvtg--- 81  Escherichia coli...
Q12YA8        5 LIFRLYGPmaSWGDIAVGqHRPTYDHPSKSAIFGLIAAALGirrDEEERHLELSNAysygtlinsagkllrdyhtsqvps 84  Methanococcoides...
Q8Z465        5 LVFQLYAPlaSWGEEASGeIRHSATVPTRSALLGLLAAALGirrDEEARLNNFNRHyhlavhalasqdrwlrdyhtvsap 84  Salmonella enter...
Q1R114        5 LVFRLYAPmaSWGEAAVGeARPTATYPGRGAILGLIGAALGirrDDDEGQLRLRQSlgiavkqrspgwllrdyhtvqvp- 83  Chromohalobacter...
Q3YYA5        5 LIFQLHGPmaSWGVDAPGeVRHTHELPSRSALLGLLAAGVGirrDDTERLNAFNRHyslvvcasrnprwardyhtvqmp- 83  Shigella sonnei ...
ZP_00129979   5 LTFQIYGPlqAYGTVAVGeIRPTSTMPTRSAVLGILAAAIGirrDEETRLAELRDGyrvavredapgkvmldyhtiqt-- 82  Desulfovibrio de...
AAL21820      5 LVFQLHGPmaSWGVDAPGeVRHSHELPSRSALLGLLAAALGirrDEEERLNAFNRHyqfllcasgnprwardyhtvqmp- 83  Salmonella enter...
Q314I4        5 LTFQIYGPlqAYGTVAVGeIRPTSTMPTRSAVLGILAAAIGirrDEETRLAELRDGyrvavredapgkvmldyhtiqt-- 82  Desulfovibrio de...
Q04QB7        5 LVFRLYGPlvSWGNIAVGeYRPSDSFPTKSAIIGLISASFGfdrSEDGKISELVKSvffatktlnpgnllrdyhtiqs-- 82  Leptospira borgp...
Q2RY19        7 LVFRLVGPmaAWGDIAVGeRRGTWDVPAKSAILGLLAAGLGidrADRTAHEALDRGlgfavrqdrpgrllrdyhtaqa-- 84  Rhodospirillum r...

Q46898       82 ----lrdyhtvlgaredyrglksheTIQTWREYLCDASFTValw-ltpHATMVISELEKAVLKPRYTPYLGRRSCPLTHP 156 Escherichia coli...
Q12YA8       85 agtgrnrktfatrkdelavpkeelnTVLSTRDYYCDGVYTVilscktdTPPYSLELLGNSLKEPSFCLYLGRKSCPLALP 164 Methanococcoides...
Q8Z465       85 --renkkyryytrrdeltlasdevgTLISQREYRCDGYWHVais-atpDAPYSLSELREALLTPHFPLYLGRKSCPLALP 161 Salmonella enter...
Q1R114       84 --psqskvnyrsrreelsvpkdalnTILSSRDYRCDGLWVValr-lmpDAVWTLDELKSALERPRFTLYLGRKACPLAAP 160 Chromohalobacter...
Q3YYA5       84 ---kevrkaryfsrreelsdpellsAIISRRDYYTDAWWMVava-ttaDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALP 159 Shigella sonnei ...
ZP_00129979  83 ---pgargkrqlhcrrdellltepnTILSRREYLMDALFTVclwqanhTVPYSLQEIARALRSPRWTIGLGRKSCPPALP 159 Desulfovibrio de...
AAL21820     84 ---kevrkaryfsrreelqdpellsALISRRDYYTDAWWMIavs-atpDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALP 159 Salmonella enter...
Q314I4       83 ---pgargkrqlhcrrdellltepnTILSRREYLMDALFTVclwqanhTVPYSLQEIARALRSPRWTIGLGRKSCPPALP 159 Desulfovibrio de...
Q04QB7       83 ---pgnvkrslltrkdelldseyveTILSSRDYRVDAVYDVals-ekkRAPYSLKEIRNALLSPIHTPYLGRKSCSIALP 158 Leptospira borgp...
Q2RY19       85 ---pkarknarwstrrdelndddlnTVLSDRLYRTNAIATPaiwrrqgTEGPTLDQLTQALLRPRFTPYLGRKACPLGWP 161 Rhodospirillum r...

Q46898      157 LFlgtcqasdpqkallNYEPVGGDIYSEE 185 Escherichia coli K-12
Q12YA8      165 INpkivsasnikealqSVDPGEEGLVKKI 193 Methanococcoides burtonii DSM 6242
Q8Z465      162 LAarlmtgtlkevfthAVEEISAAELSGF 190 Salmonella enterica subsp. enterica serovar Typhi
Q1R114      161 LTpaiveadhwrgaldHGFDSATDPERTW 189 Chromohalobacter salexigens DSM 3043
Q3YYA5      160 LAplllegnacdalcnAYQQYQDHFHKLK 188 Shigella sonnei Ss046
ZP_00129979 160 FApkitdhttpqeavaAYPADKLVSAGLR 188 Desulfovibrio desulfuricans G20
AAL21820    160 LApqllegsaagvlreAYRWYQDQFNALK 188 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Q314I4      160 FApkitdhttpqeavaAYPADKLVSAGLR 188 Desulfovibrio desulfuricans subsp. desulfuricans str. G20
Q04QB7      159 MCpeilssdsfpnafeEYNKILMKKYESS 187 Leptospira borgpetersenii serovar Hardjo-bovis JB197
Q2RY19      162 PRprllqadgllaafdAYDSAEWDAARQF 190 Rhodospirillum rubrum ATCC 11170
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap