Conserved Protein Domain Family
Cas1_I-II-III

?
cd09636: Cas1_I-II-III 
CRISPR/Cas system-associated protein Cas1
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain
Statistics
?
PSSM-Id: 187767
Aligned: 21 rows
Threshold Bit Score: 214.083
Created: 2-Feb-2010
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q57823        6 LTLLSDG-YLFRKENTIYFENarg---kkPLAIEGIYDIYIYGKVSISSQALHYLAQKGIALHFFNhYGYYDGSfypres 81  Methanocaldococc...
NP_604074    13 FFLYSNG-TLKRKDNTITFINekd--ekrDIPIEMVDDFYVMSEMNFNTKFINYISQFGIPIHFFNyYTFYTGSfyprem 89  Fusobacterium nu...
NP_632583     3 LVINTRGsFLKKQNNCFLVKVddk---tfEVSEKKVDSILITTSATITTDAIKFAVENNIDIVFLDnFGDPYGRvwhskl 79  Methanosarcina m...
NP_070703     3 LVVDGFGkYLGIENGLIVVKEkgk--alrKVRPEDLKQVLIIGKAAISSDAIKLLLKNRVDVVFLDfNGEILGRlshp-l 79  Archaeoglobus fu...
NP_624173     5 LYLFANG-KLYRKDNTICVEGeke---kkYFPVESVRDIYVFGEVDLNKKFIEFAEEKEIILHFFGyYGNYVGSfypreh 80  Thermoanaerobact...
NP_110625     4 FYITQDG-TITREGNTLYFIGpdf---krHLPVMNVQEIIISAKVSLSSWALDYLSKLGIIVHIIStNGKYMSSlipgnr 79  Thermoplasma vol...
Q46896       17 MIFLQYGqIDVIDGAFVLIDKtgi---rtHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGeAGVRVYAsgqp-g 92  Escherichia coli...
ZP_01887658  23 IYYLEYCrVLVNGGRVEYVTDegkqslywNIPIANTTVIMLGTGTSVTQAAMREFARAGVLVGFCGgGGTPLFAandvev 102 Yersinia pestis ...
NP_662853    33 FLYLEKGrIEIDDSSIKWIDCdcn---vvRLPVAMLNCILLGPGTTVTHEAVKVMAAANCGICWVGdDSLMFYAsgqt-p 108 Chlorobium tepid...
NP_229594     4 VYLFSSG-TLKRKANTICLETesg---rkYIPVENVMDIKVFGEVDLNKRFLEFLSQKRIPIHFFNrEGYYVGTfyprey 79  Thermotoga marit...
Q57823       82 lhsGYLVVNQVEhyldkdkrleLAKLFIIGGIKNMEWNLLkfknktkfssy------------------------ieeln 137 Methanocaldococc...
NP_604074    90 nisGQLLVKQVEhytneqkrveIAREFIEGASFNIYRNLRyyngrgkdlklymdq----------------ieelrkhlk 153 Fusobacterium nu...
NP_632583    80 gstTYIRRRQLQiseep-egfrLAKGWIEQKIDSQILFLKdlkknrpdqkdelddyisgm-------edmkfqlealegk 151 Methanosarcina m...
NP_070703    80 igtAKTRREQYLaygdk-rgvhLAKEFIKAKMANQMAILTnlakarkdsnpevaesllkakk--eidaclneldgveaem 156 Archaeoglobus fu...
NP_624173    81 ynsGYIILKQAEhyldsarrldLARRFVQGAVANMTQVLKyyqnrgrdledylha----------------isaleasll 144 Thermoanaerobact...
NP_110625    80 nerGNTTVQQVKaylsd-krfkIAAEMVNGIKNNILANLRyysdnneitkyika------------------iesynpdy 140 Thermoplasma vol...
Q46896       93 garSDKLLYQAKlaldedlrlkVVRKMFELRFGEPAPARRsv-------------------------------------- 134 Escherichia coli...
ZP_01887658 103 nvsWLTAQSEYRpteyl-hdwvSFWFDDEKRLAAAVAFQRiriaqiqqhwlsshiqreslfpvnhdqllfiltrfeqnla 181 Yersinia pestis ...
NP_662853   109 tsnTRNMTHQMKlaanpakaleVARRLFAYRFPDANLENKtl-------------------------------------- 150 Chlorobium tepid...
NP_229594    80 lnsGFLILKQAEhyinqekrmlIAREIVSRSFQNMVDFLKkrkvradsltry-----------------------kkkae 136 Thermotoga marit...
Q57823      138 ncnkitEVMNVEGRVRTEYYRLWDEtlp-ddfKIVKRTRRPp------KNEMNALISFLNSRLYPAIITELYNTQLTPTV 210 Methanocaldococc...
NP_604074   154 evnnveELMGYEGNIRKIYYEAWNIivn-qeiDFEKRVKNPp------DNMINSLISFVNTLFYTKVLGEIYKTQLNPTV 226 Fusobacterium nu...
NP_632583   152 ldemrgKIMGLEGMASRHYFAALSFllp-dkwKFNGRSRNPa------KDEFNCLLNYGYGVLYSKVEKACIIAGLDPYV 224 Methanosarcina m...
NP_070703   157 idkvreRLLGIEGKASKHYWDAISLvip-eeyRFNGRRGIEigspryaKDIVNAMLNYGYSILLAECVKAVELAGLDPYA 235 Archaeoglobus fu...
NP_624173   145 svssieELMALEGNIRRYYYESFNTilddtpfVLKNRNKRPp------TDPLNALISFGNSLVYTKILTEIYKTHLDPRI 218 Thermoanaerobact...
NP_110625   141 nsndinKILGVEGNIWSTYYSAFPFiyk--kyPDFKREFYPp------KDELNAMISYGNALLYATVLTKIFITGLNPSI 212 Thermoplasma vol...
Q46896      135 -----eQLRGIEGSRVRATYALLAKqy---gvTWNGRRYDPkdw--ekGDTINQCISAATSCLYGVTEAAILAAGYAPAI 204 Escherichia coli...
ZP_01887658 182 ncltsnDLMVQEAVLTKALYKLAANtv---nyGDFTRAKRGg-----gIDLANRFLDHGNYLAYGLAATATWVIGLPHGL 253 Yersinia pestis ...
NP_662853   151 -----pQMMGMEGLRVRKLYEEMAVkyk--vgWKGRRFEPGkf---emSDTTNKILTASNAALYSIILSAVHSMGYSPHI 220 Chlorobium tepid...
NP_229594   137 easnvsELMGIEGNAREEYYSMIDSlvsderfRIEKRTRRPp------KNFANTLISFGNSLLYTTVLSLIYQTHLDPRI 210 Thermotoga marit...
Q57823      211 SYLHEphERRFSLALDLSEIFKpmIADRLANRLVKQGIIQKKHF 254 Methanocaldococcus jannaschii
NP_604074   227 SYLHQpsTRRFSLSLDISEVFKplIVDRLIFSLLNKNQITEKSF 270 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
NP_632583   225 GFNHTddYNKKSFVFDLIEMYRi-HIDRTVFNLFSKKQVSDSFF 267 Methanosarcina mazei Go1
NP_070703   236 GFLHVdvSGRSSLAIDLMENFRqqVVDRVVLRLISYRQIKPEDC 279 Archaeoglobus fulgidus DSM 4304
NP_624173   219 GYLHTtnFRRFTLNLDVAEIFKpiYADRVLFTLLKKNIIKEDDF 262 Thermoanaerobacter tengcongensis MB4
NP_110625   213 SFLHEpsERSFSLALDIADIFKpvIVERTIANLVNKNIMAHDSF 256 Thermoplasma volcanium GSS1
Q46896      205 GFVHT--GKPLSFVYDIADIIKfdTVVPKAFEIARRNPGEPDRE 246 Escherichia coli K-12
ZP_01887658 254 SVLHGk-TRRGGLVFDVADLIKdaLVLPQAFIAAMQGEEEQEFR 296 Yersinia pestis CA88-4125
NP_662853   221 GFIHS--GSPLPFIYDLADLYKqqVSIDLAFSLTADMAGYYDRH 262 Chlorobium tepidum TLS
NP_229594   211 GYLHEtnFRRFSLNLDIAELFKpaVVDRLFLNLVNTRQINEKHF 254 Thermotoga maritima MSB8
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap