3BQ7,3BQ7


Conserved Protein Domain Family
SAM_DGK-delta

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cd09575: SAM_DGK-delta 
Click on image for an interactive view with Cn3D
SAM domain of diacylglycerol kinase delta
SAM (sterile alpha motif) domain of DGK-delta subfamily proteins is a protein-protein interaction domain. Proteins of this subfamily are multidomain diacylglycerol kinases with a SAM domain located at the C-terminus. DGK-delta proteins participate in signal transduction. They regulate the level of second messengers such as diacylglycerol and phosphatidic acid. In particular DGK-delta is involved in the regulation of clathrin-dependent endocytosis. The SAM domain of DGK-delta proteins can form high molecular weight homooligomers through head-to-tail interactions as well as heterooligomers with the SAM domain of DGK-eta proteins. The oligomerization plays a role in the regulation of the DGK-delta intracellular localization: it inhibits the translocation of the protein to the plasma membrane from the cytoplasm. The SAM domain also can bind Zn at multiple (not conserved) sites driving the formation of highly ordered large sheets of polymers, thus suggesting that Zn may play important role in the function of DCK-delta.
Statistics
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PSSM-Id: 188974
Aligned: 4 rows
Threshold Bit Score: 122.752
Created: 18-Nov-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
homooligomerhomooligomer
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:homooligomer interface EH [polypeptide binding site]
Evidence:
  • Structure:3BQ7; human SAM/SAM complex of DGK delta1 formed by the end-helix (EH) surface of 3BQ7_A and the mid-loop (ML) surface of 3BQ7_B, contacts at 4A.
  • Comment:SAM domains of DGK delta1 proteins interact to each other in head-to-tail manner (ML surface interacts with EH surface).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                 #   #                                   
3BQ7_A          6 PVHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHLERRDLKDL--------------------------------- 52   human
3BQ7_D          6 PVHLWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHLERRDLKDL--------------------------------- 52   human
CAG02129      747 RIHQWGTEEVGAWLDFLCLTEYKDIFTGHDVRGAELLHLERRDLKVPtprllpqwnlhflslepgpsrrlggagltvsll 826  spotted green...
XP_002197381 1101 PVHLWGTEEVAAWLEHLSLCEYKDIFIRHDVRGSELLHLERRDLKDL--------------------------------- 1147 Taeniopygia g...
Feature 1               ##### ##  #     
3BQ7_A         53 ----GVTKVGHMKRILCGIKEL 70   human
3BQ7_D         53 ----GVTKVGHMKRILCGIKEL 70   human
CAG02129      827 lqdlGVTKVGHMKRILQGIREL 848  spotted green pufferfish
XP_002197381 1148 ----GVTKVGHMKRILHGIKEL 1165 Taeniopygia guttata

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