2H80,2GYT


Conserved Protein Domain Family
SAM_DLC1,2-like

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cd09538: SAM_DLC1,2-like 
Click on image for an interactive view with Cn3D
SAM domain of DLC1,2-like subfamily
SAM (sterile alpha motif) domain of DLC-1,2-like (Deleted in liver cancer) subfamily is a protein-protein interaction domain located at the N-terminus of the protein. Members of this subfamily do not form dimers/oligomers through their SAM domains. They participate in regulation of cell migration and lipid transfer. SAM domain of human DLC1 protein contains the EF1A1 (eukaryotic elongation factor) binding motif, thus SAM facilitates recruitment of EF1A1 to the membrane periphery and suppresses cell migration. Human Dlc2 gene is known as a tumor suppressor gene. It was found underexpressed in hepatocellular carcinoma.
Statistics
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PSSM-Id: 188937
Aligned: 8 rows
Threshold Bit Score: 113.667
Created: 15-Mar-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative lipid
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:putative lipid binding site [chemical binding site]
Evidence:
  • Comment:Highlighted residues are likely involved in membrane binding (based on CD and NMR spectroscopic analysis and on similarity to DLC2 protein).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #  # #                                            
2H80_A         22 KEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNTLNKCASMK 81   human
2GYT_A         17 KEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKCAVMK 76   human
XP_002611696  211 IDACKWLRDCGFPQYAQMYEDSCFPVDITSVETDHDFLDRDSIQSLIRRLRTLNRCASMR 270  Florida lancelet
XP_001900728  269 VECVRWLRDAGFPQYARLYEEQRFPIDIRSVKRDHEFLDDDSLRALFRRLNALNRCAIMK 328  agent of lymphatic filariasis
ABX00726      917 VEACKWLRAAGFPQYAQMYEDHQFPIDLNNVAKDHTNLENDQLQSLYRRLCVLNRCATMR 976  fruit fly
XP_002116132  128 GEACQWLKFTGFSRYARAYEDGQFPIDIATVKKDNSFMDASSINAVIRRINLLNQYVNDN 187  Trichoplax adhaerens
XP_002154605   18 FEACCWLKATGFSLFAKMYEEKCFPLEVGAVKIACNHLDVDSLQSLIKRLETLNKCAKIL 77   green hydra
CAQ15665       43 KDACEWLRAAGFPQYAQLYEASLFPIEISAVRRDHEFLDQDSLKALCRRLTTLNKCAAMS 102  zebrafish

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