Conserved Protein Domain Family
SAM_CP2-like

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cd09537: SAM_CP2-like 
SAM domain of CP2-like transcription factors
SAM (sterile alpha motif) domain of CP2-like transcription factor is a putative protein-protein interaction domain. Proteins of this group have an N-terminal DNA-binding CP2 domain, a central predicted SAM domain and some also have a C-terminal dimerization domain. CP2-like family of transcriptional factors includes three subgroups: LBP1, TFCP2, and LBP9. Members of this family are involved in transcriptional regulation from early development to terminal differentiation. They play a role in regulation of expression of P450scc (the cholesterol side-chain cleavage enzyme, cytochrome) in placenta, and alpha-globin in erythroid cells. They are required for proper maturation of the dust (epithelial component of tubular organs) of kidney and salivary gland. Human LBP1 is known to be induced by HIV type I infection in lymphocytes; it represses HIV transcription by preventing the binding of TFIID to the virus promoter. Additionally, it has been suggested that UBP1 (LBP1) regulator might be a member of a blood pressure controlling network. LBP1 protein isoforms are able to form dimers apparently via SAM domain since SAM deletion or mutation resulted in a loss of this ability.
Statistics
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PSSM-Id: 188936
Aligned: 12 rows
Threshold Bit Score: 126.319
Created: 27-Jul-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9NZI7       369 TIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVC 435  human
XP_792975    427 TAAQTQEWLKQQRFENYCKPFQNFSGADLLRLAKEDLIRILGPADGIRLNNALQERHIRPRLTMYVC 493  purple urchin
XP_001653981 380 NPAALAQWLSYHRLGAYAKTFSQFSGSDLLRMSKDDLCKICGLADGIRMFNILHSKPITPRLTLYVC 446  yellow fever mosquito
XP_422087    310 SIQDAQQWLHRNRFSPFCRLFSSFSGADLLKMSKEDFVQICGPADGIRLFNAIKGRNVRPKMTIYVC 376  chicken
XP_002425547 712 NCQQTSQWLRKNSFGSHVTTFSNFTGADILRLTRDDLIQICGLADGIRLLYALHSKAIVRLTLYICT 778  human body louse
XP_002612877 321 SIQETQNWLVHNRFGNYVRTFNNFAGADLLRLTREDLVQICGPADGIRLFNALQARAIRPRLTMYVC 387  Florida lancelet
EFA06973     137 TPEETTAWLVNNRFDKYLETFANFSGADMLRMSRDDLIQICGQADGIRFYNAIHLKTIAPKLKIYVC 203  red flour beetle
NP_724893    781 TPSQVTQWLTNHRLTAYLSTFAQFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYAS 847  fruit fly
XP_001629622 373 SIEETRVWLQANRFHNYVSMFANYTGADLLRLTRQDVIQILGPADGIRLHNALQSRAARPLLTLYVS 439  starlet sea anemone
XP_393898     95 SAAQTTTWLRASRFNAFESTFASFSASDILRLSRDDLIQICGLADGIRLFNALHSKAPTPKLTLYFS 161  honey bee
XP_002402183 258 SYSPGTSAVRGNRKGEWLAVYSSFAGADVLRLTRDDLIQICGLADGIRLYNALHSRNIRPRLTTYIC 324  black-legged tick
Q12800       329 TPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVC 395  human
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