3IDW


Conserved Protein Domain Family
SAM_SLA1_fungal

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cd09532: SAM_SLA1_fungal 
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SAM domain of SLA1 subfamily
SAM (sterile alpha motif) domain of fungal SLA1 proteins is a protein-protein interaction domain. Proteins of this group consist of a few N-terminal SH3 domains followed by SHD1 domain, SAM domain (also known as SHD2) and multiple C-terminal repeats. The yeast SLA1 protein is an endocytic clathrin adaptor. It is associated with a variety of endocytic accessory factors and required for endocytic vesicle formation and for clathrin and actin-dependent cargo recognition. SLA1 binds clathrin through a variant clathrin-binding motif (vCB). The SAM domain negatively regulates this binding by blocking the vCB site. The SAM domains of SLA1 proteins can form oligomers via their mid-loop (ML) and end-helix (EH) regions. Such self-associations apparently are important for SLA1 function. A proposed regulatory model suggests that SAM can be considered a mediator of two aspects of clathrin adaptor function. It plays a role in negative regulation of clathrin binding via an intramolecular interaction with the vCB, and a role in positive regulation of vesicle coat assembly via self-oligomerization.
Statistics
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PSSM-Id: 188931
Aligned: 6 rows
Threshold Bit Score: 120.583
Created: 16-Nov-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3IDW_A    3 YDWFEFFLNCGVDVsnCQRYTINFDREQLTEDMMPDINNSMLRTLGLREGDIVRVMKHLDKK 64   baker's yeast
A7TKW4  666 YDWFEFFLNSGVDVssCQRYTSNFEKERITEDMMVDINDSILRTLGLREGDIVRVMKYLDKK 727  Vanderwaltozyma polyspora DSM 70294
A7E8B6  649 YDWFQFFLSCDVNVglCERYAQAFKRDSMDESVLPDIDATVLRNLGIREGDIIKIIRFLDKK 710  Sclerotinia sclerotiorum 1980 UF-70
Q6CHN0  578 YDWFGFFLDCGVDVhaCQRYATSFTRDQMDESILPEVTPSTLRSLGLKEGDILRVTKKLDEK 639  Yarrowia lipolytica
O13736  796 YDWFDFFLRCGVDFtvCNRYTHNFNNEHLDEACIPSLNPDTLRTLGLKEGDIIRVMNHVNEL 857  fission yeast
Q4P3H6  673 VDWFEFFLAAGVDVddCTRYASSFERDKIDETVLADLDPSTLRSIGLREGDIIRVTKFIDKK 734  Ustilago maydis
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