3K1R


Conserved Protein Domain Family
SAM_USH1G_HARP

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cd09517: SAM_USH1G_HARP 
Click on image for an interactive view with Cn3D
SAM domain of USH1G_HARP family
SAM (sterile alpha motif) domain of USH1G/HARP (Usher syndrome type-1G/ Harmonin-interacting Ankyrin Repeat-containing protein) family is a protein-protein interaction domain. Members of this family have an N-terminal ankyrin repeat region and a C-terminal SAM domain. In mammals these proteins can interact via the SAM domain with the PDZ domain of harmonin to form a scaffolding complex that facilitates signal transduction in epithelial and inner ear sensory cells. It was suggested that USH1G and HARP can be tissue specific partners of harmonin. Mutations in ush1g genes lead to Usher syndrome type 1G. This syndrome is the cause of deaf-blindness in humans.
Statistics
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PSSM-Id: 188916
Aligned: 7 rows
Threshold Bit Score: 96.2516
Created: 8-Mar-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
oligomer
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:3K1R; human SAM domain of SANS (also known as USH1G) binds the PDZ domain of harmonin, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ## # ### ## #                                            ##   #   
3K1R_B         1 ETSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLrsisvpLGPREKILGAVRRRRQAMERP 66  human
Q8K3X6       350 DATPLEVFLQSQHLEEFLPIFMREQIDLEALLLCSDEDLqnihmqLGPRKKVLSAIDKRKQVLQQP 415 house mouse
EFA08068     342 PNAPLERFLTAWGLGEYLPRFEEQKIDLETLMILTENDLqslnlpLGPYRKLVTAVSERKAALENP 407 red flour beetle
XP_001120815 447 EWTPLQRFLVANNLSSIHPVLESEQIDLEALMLLTETDIamlklpLGPKRKLMNAIANRKRALDAP 512 honey bee
XP_783343    349 SSSAIELFLTVNDLEDYIPVFFDEDIDMKALELLTDQDIldlklpLGPRRKLNQAIAKRKEALATP 414 purple urchin
AAF58438     443 GGSALQRFLAVWALEEYLPVFQKQEIDLETLMLLTESDLkslglpLGPFRKLTFAIQERRNALANP 508 fruit fly
NP_001121501 333 ETSALQVFLVSHGLIELFATLIREKIDLDALMLCSNEDLqsinipLGPRKKVLNAIEKRKNIIDKP 398 western clawed frog

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