2F3N


Conserved Protein Domain Family
SAM_Shank1,2,3

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cd09506: SAM_Shank1,2,3 
Click on image for an interactive view with Cn3D
SAM domain of Shank1,2,3 family proteins
SAM (sterile alpha motif) domain of Shank1,2,3 family proteins is a protein-protein interaction domain. Shank1,2,3 proteins are scaffold proteins that are known to interact with a variety of cytoplasmic and membrane proteins. SAM domains of the Shank1,2,3 family are prone to homooligomerization. They are highly enriched in the postsynaptic density, acting as scaffolds to organize assembly of postsynaptic proteins. SAM domains of Shank3 proteins can form large sheets of helical fibers. Shank genes show distinct patterns of expression, in rat Shank1 mRNA is found almost exclusively in brain, Shank2 in brain, kidney and liver, and Shank3 in heart, brain and spleen.
Statistics
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PSSM-Id: 188905
Aligned: 14 rows
Threshold Bit Score: 110.101
Created: 8-Mar-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:polymer interface (intrafiber) [polypeptide binding site]
Evidence:
  • Comment:Highlighted residues are important for Shank proteins SAM-SAM domain interactions and formation of long individual fibers (based on mutagenesis and EM image).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                     # #    #              
2F3N_A          1 MLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALRQLD 66   Norway rat
Q9WV48       2100 PLGFWTKFDVADWLEWLGLSEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFL 2165 Norway rat
Q9BYB0       1674 PLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERALRQLD 1739 human
Q9Y566       2094 PLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFL 2159 human
XP_426415    1703 PVHLWTKPDVADWLESLNLGEHKETFMDNEIDGTHLPNLQKEDLIDLGVTRVGHRMNIERALKQLL 1768 chicken
NP_001121819 1733 PVLLWSKQDVADWLESLNLGEHRDAFMDNDIEGSHLPNLQKEDLIDLGVTRVGHRMNIERALKVLL 1798 zebrafish
XP_002433393 1455 PLIEWSARDVSDWLESLFLQEYRPRFIEAGITGVKLANMDSNDFMGLGVKQVGHRINMERSLRRYM 1520 black-legged tick
XP_786852     955 SVSEWTVEDVSDWLEELNLGEYKESFTDNAISGEHLTSLGKEDLSELGVKRLGHRLTIIKALQKLQ 1020 purple urchin
XP_002123894  339 PLHEWDVAEVGRWLVGIGLGTHAEKFAENEIDGSHLPQLGKDELSELGVTRVGHRLNFERSLKKLS 404  Ciona intestinalis
XP_001900267 1168 QVASWTTDDIVAWLKTLGLSEHSRKFQQFRIDGTHLLSFDRSLLTQLGVTRIGHRQLIERSLKSLS 1233 agent of lymphatic filariasis

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