Conserved Protein Domain Family
SAM_WDSUB1

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cd09505: SAM_WDSUB1 
SAM domain of WDSUB1 proteins
SAM (sterile alpha motif) domain of WDSUB1 subfamily proteins is a putative protein-protein interaction domain. Proteins of this group contain multiple domains: SAM, one or more WD40 repeats and U-box (derived version of the RING-finger domain). Apparently the WDSUB1 subfamily proteins participate in protein degradation through ubiquitination, since U-box domain are known as a member of E3 ubiquitin ligase family, while SAM and WD40 domains most probably are responsible for an E2 ubiquitin-conjugating enzyme binding and a target protein binding.
Statistics
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PSSM-Id: 188904
Aligned: 11 rows
Threshold Bit Score: 121.27
Created: 8-Mar-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8N9V3       328 FTEDWSEEDVSTWLCAQD-LKDLVGIFKMNNIDGKELLNLTKESLADDLKIeSLGLRSKVLRKIEELRTKVKS 399 human
A0AUS0       343 MVSEWSEEEVLAWLREEG-LEAVTDAFKSNNIDGEELLSLSKETLSSDLHIeSLGLRSKVMKKIEELKMVPVY 414 zebrafish
Q5ZMC3       329 TAENWSEDDVSAWLCAQG-FAELVGLFKANNIDGKELVNLTRESLIHELKM-SLWLRSKILQKIEELRMKMVS 399 chicken
CAF99784     325 LVGDWSEADVSSWLVEEG-LEGLVDKFRANNIDGSELLSLTKETLASELHIeSVGLRNKLLRKVQELKNESDC 396 spotted green pufferfish
NP_001106313 326 HVETWSEEKVATWLSQEG-LNEVEHIFKANNIDGKELLHLTKESLLRDLKIeSLGLRNKLVRRIEDLKGGAKA 397 African clawed frog
XP_001185648 163 VISDWTVDAVCEWLQSIN-LEQHCETFRENHIDGQELQNLTTEVLSKDLNVkALGHRQKILRGIQAVREKGFF 234 purple urchin
XP_001629677 336 RLVTWTVEEVCTWLESIG-LAQYSEVFRNNAIDGHELSNMTGNVLLTDLTIgPAGHRNKILRSIKDTKKEEID 407 starlet sea anemone
XP_002109494 390 SLQAMTLDDTCNWLKTIG-MERYEKQFRHHQISGSILPTLTSISLMRDLSIePLGHRNQILRAIQELKDRLDN 461 Trichoplax adhaerens
XP_002130425 362 SFQNWSCDEVGEWLTNEMkLEQYVEAFKNNDIDGAELESLTSEILQKELGItPLGHRNKIIRAIKALQGGKRA 434 Ciona intestinalis
XP_002589773 368 PLSDWSVEEVCSWLREKG-LEHHVETFRENEIDGNELKQLTNETLSKDLGIaALGQRNKILRGIKALQESESS 439 Florida lancelet
XP_002158403 241 SPQSWTVEDVCTWLRSIA-LDDYVEVFTTNAIDGTELMCLNDDSLSNSLNIsPLGHRNKIIREINQLKQLSYY 312 green hydra
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