Conserved Protein Domain Family
LIM6_LIMPETin

?
cd09432: LIM6_LIMPETin 
The sixth LIM domain of protein LIMPETin
The sixth LIM domain of protein LIMPETin: LIMPETin contains 6 LIM domains at the C-terminal and an N-terminal PET domain. Four of the six LIM domains are highly homologous to the four and half LIM domain protein family and two of them show sequence similarity to the LIM domains of the testin family. Thus, LIMPETin may be the recombinant product of genes coding testin and FHL proteins. In Schistosoma mansoni, where LIMPETin was first identified, LIMPETin is down regulated in sexually mature adult Schistosoma females compared to sexually immature adult females and adult male. Its differential expression indicates that it is a transcription regulator. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
?
PSSM-Id: 188816
Aligned: 6 rows
Threshold Bit Score: 97.5465
Created: 22-Jul-2010
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment: The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                    #  #  #  #                 #  # 
XP_002410816 276 CTACSKPITGIGGTRFISFEDRNWHNDCFICAMCNNSLVGKGFITDGPEILCPECA 331 black-legged tick
NP_730212    498 CTACVKPITGIGGTRFISFEDRHWHHDCFVCASCKASLVGRGFITDGPDILCPDCA 553 fruit fly
NP_001021410 592 CNACTKPITGIGGAKFISFEDRHWHNDCFICAQCTTSLVGKGFITDGHEILCPECA 647 nematode
XP_002337726  53 CAKCGKPITGLGGTKFISFEGQNWHSQCFNCVGCGTSLVGKGFTNEGGRILCPDCT 108 black cottonwood
XP_002604207 227 CAHCRKPITGHGGTKFVSFEDQSWHSDCFNCSGCRTSLVGKGFTAEEGRILCPDCT 282 Florida lancelet
EFA03663     346 CFACNKPITGIGGTKFISFEDRHWHNDCFFCASCRTSLVGRGFITDQEDIICPECA 401 red flour beetle

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap