Conserved Protein Domain Family
LIM1_Testin

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cd09413: LIM1_Testin 
The first LIM domain of Testin
The first LIM domain of Testin: Testin contains three C-terminal LIM domains and a PET protein-protein interaction domain at the N-terminal. Testin is a cytoskeleton associated focal adhesion protein that localizes along actin stress fibers, at cell-cell-contact areas, and at focal adhesion plaques. Testin interacts with a variety of cytoskeletal proteins, including zyxin, mena, VASP, talin, and actin and it is involved in cell motility and adhesion events. Knockout mice experiments reveal that tumor repressor function of Testin. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 188797
Aligned: 12 rows
Threshold Bit Score: 114.093
Created: 3-Aug-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                      #  #  #  #                 #  # 
Q90YH9       236 CYRCKLNMKEGdPAVYAERAGYDKLWHPACFVCCTCSELLVDMIYFWKNGNLYCGRHY 293 chicken
Q7ZXE9       236 CFRCKENMREGdPAVYAERAGYDKLWHPSCFVCFTCNELLVDMIYFWKNGKLYCGRHY 293 African clawed frog
P47226       238 CYCCKHTTNEGePAIYAERAGYDKLWHPACFICSTCGELLVDMIYFWKNGKLYCGRHY 295 house mouse
AAH75889     354 CHQCQKPMKKGePAVFAERAGYDKLWHPACFVCCTCTELLVDMIYFWKKGQLYCGRHY 411 zebrafish
AAL40362     506 CQHCGQPMRLGePAVYAERAGYDKLWHPACFVCCTCKELLVDMIYFWKKGKLYCGRHY 563 torafugu
Q108U9       236 CYCCKLSMKEGdPAVYAERAGYDKLWHPACFVCSACSELLVDMIYFWKNGKLYCGRHY 293 African savanna elephant
NP_001030036 226 CYCCKHPMKEGdPAIYAERAGYSKLWHPACFICSICGEILVDMIYFWKNGKLYCGRHY 283 house mouse
XP_001061554 225 CYSCKHAVKEGnPAIFAERAGYDKLWHPACFICTICGEILVDMIYFWKNGKLYCGRHY 282 Norway rat
NP_001107222 221 CYCCKQPIKEGdTAIYAERAGYNKLWHPSCFICSTCGELLVHMIYFWKNGKLYCGRHY 278 Norway rat
CAM19142     225 CYCCKQSMKEGdAAIFAERAGYDKLWHPACFICSTCGEILVHMIYFWKNEKLYCGRHY 282 house mouse
NP_991283    354 CHQCQKPMKKGePAVFAERAGYDKLWHPACLVCCTCTELLVDMIYFWKKGSALLWPSL 411 zebrafish
EDM10798     143 CYCCKQTVKEGdLVIFAERAGYDKCWHPDCFICSTCGEFLVHMVYFWKNGKLYCGRHY 200 Norway rat

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