Conserved Protein Domain Family
LIM4_Paxillin

?
cd09411: LIM4_Paxillin 
The fourth LIM domain of Paxillin
The fourth LIM domain of Paxillin: Paxillin is an adaptor protein, which recruits key components of the signal-transduction machinery to specific sub-cellular locations to respond to environmental changes rapidly. The C-terminal region of paxillin contains four LIM domains which target paxillin to focal adhesions, presumably through a direct association with the cytoplasmic tail of beta-integrin. The N-terminal of paxillin is leucine-rich LD-motifs. Paxillin is found at the interface between the plasma membrane and the actin cytoskeleton. The binding partners of paxillin are diverse and include protein tyrosine kinases, such as Src and FAK, structural proteins, such as vinculin and actopaxin, and regulators of actin organization. Paxillin recruits these proteins to their function sites to control the dynamic changes in cell adhesion, cytoskeletal reorganization and gene expression. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
?
PSSM-Id: 188795
Aligned: 9 rows
Threshold Bit Score: 113.892
Created: 2-Aug-2010
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment: The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                #  #  #  #                 #  # 
NP_963882    477 CSGCQKPITGRCITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQSCF 528 zebrafish
P49024       503 CSGCQKPITGRCITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCF 554 chicken
NP_001081420 492 CSGCQKPITGRCITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCF 543 African clawed frog
XP_002127320 402 CSGCQKPITGRCITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHQCF 453 Ciona intestinalis
P49023       535 CSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCF 586 human
NP_001033913 525 CAGCSKPITGRCITAMFKKFHPEHFVCAFCLKQLNKGTFKEQKDKPYCHTCF 576 fruit fly
XP_002407362 507 CAGCHKPITGRCITAMFRKYHPEHFVCSFCLGQLNKGTFKEQNDKPYCHACF 558 black-legged tick
XP_780574    639 CAGCNKPITGRCITAMQRKFHPEHFVCDYCLKQLNKGTFKEQNGKAYCHSCF 690 purple urchin
XP_002168161 378 CYSCQKPITGRCITAMHRKFHPEHFICAFCLKQLNKGTFKEQNDKPYCHGCF 429 green hydra

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap