2DAR


Conserved Protein Domain Family
LIM1_Enigma_like

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cd09361: LIM1_Enigma_like 
Click on image for an interactive view with Cn3D
The first LIM domain of Enigma-like family
The first LIM domain of Enigma-like family: The Enigma LIM domain family is comprised of three members: Enigma, ENH, and Cypher (mouse)/ZASP (human). These subfamily members contain a single PDZ domain at the N-terminus and three LIM domains at the C-terminus. Enigma was initially characterized in humans and is expressed in multiple tissues, such as skeletal muscle, heart, bone, and brain. The third LIM domain specifically interacts with the insulin receptor and the second LIM domain interacts with the receptor tyrosine kinase Ret and the adaptor protein APS. Thus Enigma is implicated in signal transduction processes, such as mitogenic activity, insulin related actin organization, and glucose metabolism. The second member, ENH protein, was first identified in rat brain. It has been shown that ENH interacts with protein kinase D1 (PKD1) via its LIM domains and forms a complex with PKD1 and the alpha1C subunit of cardiac L-type voltage-gated calcium channel in rat neonatal cardiomyocytes. The N-terminal PDZ domain interacts with alpha-actinin at the Z-line. ZASP/Cypher is required for maintenance of Z-line structure during muscle contraction, but not required for Z-line assembly. In heart, Cypher/ZASP plays a structural role through its interaction with cytoskeletal Z-line proteins. In addition, there is increasing evidence that Cypher/ZASP also performs signaling functions. Studies reveal that Cypher/ZASP interacts with and directs PKC to the Z-line, where PKC phosphorylates downstream signaling targets. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 188747
Aligned: 9 rows
Threshold Bit Score: 73.9348
Created: 7-May-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Structure:2DAR_A: Human ENH protein LIM1 domain binds Zn
  • Comment:The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #                #  #  #  #                   #  # 
2DAR_A         28 CAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMay--igFVEEKGALYCELCY 79   human
XP_002595989  821 CDSCNQIIRGPFVVAIGRCWMPDCFTCAHCKCNLie--mgFVEEEGQLYCSTHY 872  Florida lancelet
Q6INU3        246 CSQCNKIIRGRFLLALGRYYHPEEFTCSQCHKVLee--ggFFEEKGSIFCPCCY 297  African clawed frog
AAY27884      467 CATCNNIIRGPFLVALGRSWHPEEFNCHYCHTSLad--vsFVEEQNNVYCENCY 518  zebrafish
XP_001898987   40 CEDCKQEIRDAYVLANGLAYCPDHFICSNKLCGRklldigFVEEKGHKYCERCF 93   agent of lymphatic filariasis
CAF99227      357 CNKCKNVIRGPFLVAMGLSWHPEEFTCAHCNSSLae--ngFVEEKGQLYCQHCY 408  spotted green pufferfish
NP_001002654  375 CAHCDMVIRGPFLVAMGKSWHPEEFTCAHCSVSLse--lgFVEEQGSVYCQHCY 426  zebrafish
NP_956490     452 CAHCNTVIRGPFLVAMGKSWHKDEFTCSHCRSSLad--vgFVEERGSVYCVLCY 503  zebrafish
XP_002168911  461 CHACEQPLIGPFVSAIGRTWHPEHFCCSACNTSLqn--qaFVEENNSLYCEKCY 512  green hydra

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