Conserved Protein Domain Family
LIM2_LPP

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cd09354: LIM2_LPP 
The second LIM domain of lipoma preferred partner (LPP)
The second LIM domain of lipoma preferred partner (LPP): LPP is a member of the zyxin LIM protein family and contains three LIM zinc-binding domains at the C-terminal and proline-rich region at the N-terminal. LPP initially identified as the most frequent translocation partner of HMGA2 (High Mobility Group A2) in a subgroup of benign tumors of adipose tissue (lipomas). It was also shown to be rearranged in a number of other soft tissues, as well as in a case of acute monoblastic leukemia. In addition to its involvement in tumors, LPP was inedited as a smooth muscle restricted LIM protein that plays an important role in SMC migration. LPP is localized at sites of cell adhesion, cell-cell contacts and transiently in the nucleus. In nucleus, it acts as a coactivator for the ETS domain transcription factor PEA3. In addition to PEA3, it interacts with alpha-actinin,vasodilator stimulated phosphoprotein (VASP),Palladin, and Scrib. The LIM domains are the main focal adhesion targeting elements and that the proline- rich region, which harbors binding sites for alpha-actinin and vasodilator- stimulated phosphoprotein (VASP), has a weak targeting capacity. As in other LIM domains, this domain family is 50-60 amino acids in size and shares two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein.
Statistics
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PSSM-Id: 188740
Aligned: 8 rows
Threshold Bit Score: 120.727
Created: 3-Aug-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                #  #  #  #                  #  #        
XP_002601179 101 CSVCSKPIMERILRATGKPYHPACFTCVVCGKSLDGIPFTVDATNQIHCIEDFHKKFAPR 160 Florida lancelet
XP_002408369 182 CCVCEKPILDRILRATGKPYHPACFKCVMCGKCLDGIPFTVDATNQIHCIDDFHKKFAPR 241 black-legged tick
XP_798292    318 CSTCSQPITDRILRATGKPYHPDCFTCVVCGKSLDGVPFTVDATNQIHCIEDFHRKFAPR 377 purple urchin
NP_726639    427 CSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPR 486 fruit fly
XP_001844057 455 CSVCQKPILERILRATGKPYHPQCFTCVICGKSLDGIPFTVDATNQIHCIEDFHKKFAPR 514 southern house mosquito
XP_001996491 481 CSVCLKPILERILRATGKPYHPQCFTCVVCGNSLDAIPFTVDATNQNYCIADFHKKFAPR 540 Drosophila grimshawi
XP_967989    348 CCVCQKPILDRILRATGKPYHPKCFCCVVCGKSLDGIPFTVDATNRVHCIEDFHKIFAPR 407 red flour beetle
XP_001599375 407 CCVCTLPILDRILRATGKPYHPSCFTCVVCGQSLDGIPFTVDATNQVHCIQCFHKKFAPR 466 jewel wasp

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