2EGQ


Conserved Protein Domain Family
LIM4_FHL1

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cd09348: LIM4_FHL1 
Click on image for an interactive view with Cn3D
The fourth LIM domain of Four and a half LIM domains protein 1 (FHL1)
The fourth LIM domain of Four and a half LIM domains protein 1 (FHL1): FHL1 is heavily expressed in skeletal and cardiac muscles. It plays important roles in muscle growth, differentiation, and sarcomere assembly by acting as a modulator of transcription factors. Defects in FHL1 gene are responsible for a number of Muscular dystrophy-like muscle disorders. It has been detected that FHL1 binds to Myosin-binding protein C, regulating myosin filament formation and sarcomere assembly. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 188734
Aligned: 9 rows
Threshold Bit Score: 106.386
Created: 7-May-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Structure:2EGQ_A: Human Four and half LIM domain protein 1 LIM4 domain binds Zn
  • Comment: The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #  #                     #  #  #  #                 #  #    
2EGQ_A        14 VAKKCAGCKNPITGFGkgssVVAYEGQSWHDYCFHCKKCSVNLAnKRFVFHQEQVYCPDCAKKL 77  human
XP_001234114 123 VAKKCAGCKNPITGFGrgtsVVNYEDESWHDYCFKCTKCARGLAnKRFVCHNGKIYCAECPKRL 186 chicken
NP_001007288 234 VAKKCSGCQNPITGFGrgtnVVNYEDKSWHEYCFNCKKCSLSMAhKRFVINGEDIYCSDCAKKL 297 zebrafish
NP_001087359 217 VAKKCSGCNNPITGFGkgssVVNHEGNTWHEYCFTCKKCSLNLAnKRFVRHNEQVYCQDCAKKL 280 African clawed frog
CAF92807      59 VAKKCGGCQNPITGFGkgvnVVNYEGSSYHEYCFNCKRCSLNLSnKRFVTKGRDILCADCGSNL 122 spotted green pufferfish
NP_954687    217 VAKKCSGCQNPITGFGkatnVVNYEGGSWHDYCFNCKKCSLNLAdKRFVAHSGHIYCSDCSKKL 280 zebrafish
ABC75559      54 VAKKCSSCQNPITGFGkatnVVNYEGGTWHDYCFTCKKCAVNLAeKRFISKDGNIYCSDCAKKL 117 channel catfish
ACM08815     217 VAKKCNGCQNPITGFGkatnVVNYEGSSWHEHCFNCKKCSLSLA-NKRFVANGGNIFCSDCAKV 279 Atlantic salmon
BAB24273     216 IAKKCAGCKNPITGFGkganVVAHEQNSWHDYCFNCKTCSVNLAnKHFVFHDEQVYCPDCARNL 279 house mouse

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