Conserved Protein Domain Family
LIM2_Testin_like

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cd09341: LIM2_Testin_like 
The second LIM domain of Testin-like family
The second LIM domain of Testin-like family: This family includes testin, prickle, dyxin and LIMPETin. Structurally, testin and prickle proteins contain three LIM domains at C-terminal; LIMPETin has six LIM domains; and dyxin presents only two LIM domains. However, all members of the family contain a PET protein-protein interaction domain. Testin is a cytoskeleton associated focal adhesion protein that localizes along actin stress fibers, at cell-cell-contact areas, and at focal adhesion plaques. Testin interacts with a variety of cytoskeletal proteins, including zyxin, mena, VASP, talin, and actin and it is involved in cell motility and adhesion events. Prickles have been implicated in roles of regulating tissue polarity or planar cell polarity (PCP). Dyxin involves in lung and heart development by interaction with GATA6 and blocking GATA6 activated target genes. LIMPETin might be the recombinant product of genes coding testin and four and half LIM proteins and its function is not well understood. As in other LIM domains, this domain family is 50-60 amino acids in size and shares two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 188727
Aligned: 29 rows
Threshold Bit Score: 86.8898
Created: 21-Jul-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment: The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #                 #  #  #  #                 #  #  
XP_001194491  315 PRCAACDEIIFAdecteAEGRSWHMKHFCCFECDTQLggqrYIMREGHPYCCHCFE 370  purple urchin
NP_501190     335 PRCAGCDELIFAneytfAEEKSWHFDHFACYKCDFKLggsrYMTRDENPFCLDCYL 390  nematode
NP_730212     255 PRCAGCDELIFSgeytkAMDKDWHSGHFCCWQCDESLtgqrYVIRDDHPYCIKCYE 310  fruit fly
XP_003147918  321 PRCSGCDELIFSkeytfAEDKSWHLDHFCCFGCDMQLgghrYMMKDEQPYCFNCYM 376  Loa loa
XP_002163384  252 PRCHGCEELIYIgeftkAMEKSWHVEHFCCWQCDVPItgkkYIIINKRPYCQRCYV 307  green hydra
XP_001641741  256 PRCAGCEELIYVgeysqALEKNWHPGHLCCSYCDESLsnqkFVTVEGSPSCFRCYD 311  starlet sea anemone
XP_001633163  230 SRCGGCDELIFTgeytvAMNKNWHLGHFQCQTCDHSItgrqFIVRGDKPVCTDCFK 285  starlet sea anemone
NP_001025228  312 PRCSACDELIFAgeytkAMNKDWHSDHFCCWQCDQTLtgqrYIMRDEQPYCIKCYE 367  nematode
XP_784011     865 PRCASCDELIFTgeyvrAMDENFHSGHFCCQQCDKALsgqsYILKEEKPFCVACYD 920  purple urchin
ACA13258      257 PRCVTCDHLIFSeeytrAMEQEHHTGHFACHSCDVSLtgqrYILRDDEPHCLACYE 312  Schistosoma mansoni

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