1JAC,1XEZ,3AQG,3LL2


Conserved Protein Domain Family
Jacalin_like

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cd09302: Jacalin_like 
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Jacalin-like lectin domain
Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. Taxonomic distribution is not restricted to plants, the domain is also found in various mammalian proteins, for example.
Statistics
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PSSM-Id: 187706
Aligned: 15 rows
Threshold Bit Score: 65.8865
Created: 19-Nov-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative sugar
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:putative sugar binding site [chemical binding site]
Evidence:
  • Structure:3LL2: Griffithsia sp. Q66D336 griffithsin binds a high-mannose branched carbohydrate, contacts at 4 A
  • Structure:1XEZ: Vibrio cholerae cytolysin binds octylglucoside, contacts at 4 A
  • Structure:1JAC: Artocarpus heterophyllus jacalin binds methyl-alpha-D-galactose, contacts at 4 A
  • Citation:PMID 8673603

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #                                                                               
1JAC_A          1 GKAFDDgaf----tgiREINLSYNKe---tAIGDFQVVydlng------------------------spyvGQNHKSFIt 49   jackfruit
1XEZ_A        600 GKMNQQrvg-----qdNRLYVRAGA-----AIDALGSAs--------------------------------DLLVGGNGg 637  Vibrio cholerae
3AQG_A         11 GKYFSTtedy--dheiTGLRVSVGLl----LVKSVQVKlgd----------------------------swDVKLGALGg 56   human
3LL2_A         12 GSPFSGsg-------lSSIAVRSGS-----YLDAIIID---------------------------------GVHHGGSGg 46   Griffithsia s...
Q5CZR5         15 GSSFSFtgenn-gaslEKIWVWVGGw----QIKAVRAWl-------------------------------sDGRDETFGv 58   zebrafish
YP_001329254   14 GHPFRQfgnd--csviHSIRVWIDSldkhrIIKALEVTf-------------------------------tDGITTKMCg 60   Methanococcus...
NP_001134309   13 GNSFEFhgmdn-gatlKKIGVAVEGw----QIKAVRAEl-------------------------------tDGRVATFGn 56   Atlantic salmon
YP_003042547  283 LKPALNggkrrkinslMGHIVRIGGa---pRVGGLTVVf-------------------------------dDGSRHQLGt 328  Photorhabdus ...
CBJ29380     1042 FLPAGRv---------REIVGWSGD-----AVNGVQVVydvqg------------------------davrGPKRMGDHg 1083 Ectocarpus si...
NP_983858     535 AGIISIfpr-----evEAVRVYHGY-----ALDGIRFYfrspqqinddaagshdyfrklknslkgpsrnrsASALFGREt 604  Ashbya gossyp...
Feature 1                                              #                                          
1JAC_A         50 g----ftPVKISLdf-psEYIMEVSGYTGNvsg--yvVVRSLTFKTNk-kTYGPYGVTS----GTPFNLPi--eNGLIVG 115  jackfruit
1XEZ_A        638 ------sLSSVDL-----SGVKSITATSGDfqy-ggqQLVALTFTYQd-gRQQTVGSKAyvtnAHEDRFDlp-dAAKITQ 703  Vibrio cholerae
3AQG_A         57 ------nTQEVTLqp--gEYITKVFVAFQA-------FLRGMVMYTSk-dRYFYFGKLD----GQISSAYpsqeGQVLVG 116  human
3LL2_A         47 ------nLSPTFTfg-sgEYISNMTIRSGD-------YIDNISFETNmgrRFGPYGGSG----GSANTLS----NVKVIQ 104  Griffithsia s...
Q5CZR5         59 ps--gshQEYVFT-----PGECFTSLSLWGnga--gtRLGAIKFKTNk-gGEFFAHMTSwg-lKTEYPMDv--gSGYCLG 125  zebrafish
YP_001329254   61 eshgnvhTEYVFK-----PGEKIESMSLWDcgnpkklRAGRILFKTS---NGITVDTGKck-gKTEFPVNv--gSGILVG 129  Methanococcus...
NP_001134309   57 s-----hTFNEFQf---dLGERITKLSLWGnga--gtRLGAIKFTTSk-nRQFFEKMTSwp-lKTEYTIDv--gSGICLG 122  Atlantic salmon
YP_003042547  329 is---geTASISL-----DSSRITSLEVWGnga--vdKAVFTLSDGRs-lSFGEPGTSR----YRKFYVGe---SHYISG 390  Photorhabdus ...
CBJ29380     1084 l----yrQSNFVLdveggEVLTEISVKAGA-------IVDSVRVRTNk-gREKTWGGAGgh-lQRTWHVPt---GSSFLG 1147 Ectocarpus si...
NP_983858     605 n-----nYSDFVLsp--dESLLGFNVRSGC-------WIDAVQIITSqgrTSPLFGNTSgg-gLGTLVPPt---GYEVLA 666  Ashbya gossyp...
Feature 1                  ## #       
1JAC_A        116 FKGSIg---YWLDYFSMYLS 132  jackfruit
1XEZ_A        704 LKIWAd--dWLVKGVQFDLN 721  Vibrio cholerae
3AQG_A        117 IYGQYq--lLGIKSIGFEWN 134  human
3LL2_A        105 INGSAg---DYLDSLDIYYE 121  Griffithsia sp. Q66D336
Q5CZR5        126 IVGRGgs-dIDCMGFMFLNA 144  zebrafish
YP_001329254  130 IEGGSga-dVDRIGFIFIKP 148  Methanococcus maripaludis C7
NP_001134309  123 LQGRSgs-dIDSMGFLFINT 141  Atlantic salmon
YP_003042547  391 IYLSSdyspLVGQAANIAVS 410  Photorhabdus asymbiotica
CBJ29380     1148 FHGGVg---GHVHSLGVTLA 1164 Ectocarpus siliculosus
NP_983858     667 LHGRVg---QWVDAMGIIYG 683  Ashbya gossypii ATCC 10895

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