Conserved Protein Domain Family
GluRS_non_core

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cd09287: GluRS_non_core 
catalytic core domain of non-discriminating glutamyl-tRNA synthetase
Non-discriminating Glutamyl-tRNA synthetase (GluRS) cataytic core domain. These enzymes attach Glu to the appropriate tRNA. Like other class I tRNA synthetases, they aminoacylate the 2'-OH of the nucleotide at the 3' end of the tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. These enzymes function as monomers. Archaea and most bacteria lack GlnRS. In these organisms, the "non-discriminating" form of GluRS aminoacylates both tRNA(Glu) and tRNA(Gln) with Glu, which is converted to Gln when appropriate by a transamidation enzyme.
Statistics
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PSSM-Id: 185682
Aligned: 12 rows
Threshold Bit Score: 378.617
Created: 4-Oct-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:active site [active site]
Evidence:
  • Comment:Based on sequence similarity to family members.
  • Comment:tRNA is required for amino acid activation

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #####     # ## ##                   # ##                                    
Q58772     91 KVVMRFAPNPSGPLHIGHARAAVLNDYFVKKYGGKLILRLEDTDPKR------VLPEAYDMIKEDLDWLGVKVd-eVVIQ 163 Methanocaldococcus...
P95968    101 QVVTRFAPNPDGPLHLGNARSAILSYEYAKMYNGKFILRFDDTDPKVk----rPILDAYDWIKEDLKWLGIKWe-qELYA 175 Sulfolobus solfata...
O26157     96 EVVLRFAPNPSGPLHIGHARAAILNHEYARKYDGRLILRIEDTDPRR------VDPEAYDMIPADLEWLGVEWd-eTVIQ 168 Methanothermobacte...
O29979     93 KVVMRFAPNPNGPPTLGSARGIIVNGEYAKMYEGKYIIRFDDTDPRTk----rPMIEAYEWYLEDIEWLGYKPd-eVIYA 167 Archaeoglobus fulg...
Q8ZU33    100 GVVVRFAPNPDFVLHLGSARPAILNYAYRIKYGGKFILRFEDTDPRIksplvtEEVNAYESIREDLRWLGVRWd-eEYIQ 178 Pyrobaculum aeroph...
AAF97196  123 EIVLRFAPNPNGPLSFGHARGVVINGTYAHEHKGTLILRFDDTDTTVk----pPMLDAYDIIPKEVEWLLGRPadrIVLA 198 uncultured marine ...
NP_280054 107 EVRMRCAPNPNGPWHVGHARMPSVIGTYKQRYDGSFVVRFDDTDPETk----rPDLDAYDQILEDLSYLGFEAd-eVLTA 181 Halobacterium sp. ...
Q8TT52    103 KVVMRFAPNPNGPGTLGSARGMVVNSEYVKMYKGKFVLRFDDTDPDIk----rPMLEAYDWYLDDFKWLGVVPd-rVVYA 177 Methanosarcina ace...
Q8TXB7     98 NVRLRFAPNPSGPLHIGHARAAVLNDEYARRYDGTLVLRIEDTDPRR------VDPEAYDMIEEDLEWLGVNId-eRYVQ 170 Methanopyrus kandleri
O59314     98 KVVTRFAPNPDGAFHLGNARAAILSYEYAKMYGGKFILRFDDTDPKVk----rPEPIFYKMIIEDLEWLGIKPd-eIVYA 172 Pyrococcus horikoshii
Q9HJM5     95 PVVMRMAPSPSGPLHIGHTRMAILNDEYVKRYGGELILRIEDTNPKN------IDPDAYHMIPEDLEWLGVNVt-kIVIQ 167 Thermoplasma acido...
Q9Y9H1    102 RVKLRFAPNPDFVIHMGNARPAIVNHEYARMYKGRMVLRFEDTDPRTk----tPLREAYDLIRQDLKWLGVSWd-eEYIQ 176 Aeropyrum pernix
Feature 1                                                                                     
Q58772    164 SDRIELYYEYGRKLIEMGHAYVcdcnpeefrelrnkgvpckcrdraiednlelwekm----------lngelenvavrlk 233 Methanocaldococcus...
P95968    176 SERLELYYKYARYLIEKGYAYVdtcdssifrkfrdsrgkmkepeclhrssspesnlelfekmlggkfkegeavvrlktdl 255 Sulfolobus solfata...
O26157    169 SDRMETYYEYTEKLIERGGAYVctcrpeefrelknrgeachcrslgfrenlqrwrem----------femkegsavvrvk 238 Methanothermobacte...
O29979    168 SRRIPIYYDYARKLIEMGKAYTcfcsqeefkkfrdsgeecphrnisvedtlevwerml--------egdyeegevvlrik 239 Archaeoglobus fulg...
Q8ZU33    179 SQRMEIYYEHAKKLLEMGAAYVdlckpeewrrlrnekkacphreqppevnlelwdkmleg-----rfkegeavlriktdl 253 Pyrobaculum aeroph...
AAF97196  199 SDRIPLYYDHAERMLKEGFGYIcqcpaedfrtfretkencpcrdksvemnaegwrmmldgs---ynpgdavvrvktdmgl 275 uncultured marine ...
NP_280054 182 SDRVETYYEHARRLIGMGGAYTcscpgaefsdlknsgeacphrdkdpetvadefeamvd-------geynsgemvlrvkt 254 Halobacterium sp. ...
Q8TT52    178 SDHFPIYYDYARKLIEMGKAYVcfckgedfkrlkdakqacphrdtspeenlmhwekmla------geyedqqavlriktd 251 Methanosarcina ace...
Q8TXB7    171 SNRIELYYMVCEELLEREGAYVctcdpdefrrlrdvgracpcrsrdkeenlelweeml--------dgtfsegeavvrvk 242 Methanopyrus kandleri
O59314    173 SDRLEIYYKYAEELIKMGKAYVctcppekfrelrdkgipcphrdepvevqlerwkkmln-------geykegeavvrikt 245 Pyrococcus horikoshii
Q9HJM5    168 SDRFDLYYAEAKKLMENGHMYVctcpreefkkrklesipckdrdnppetnlelfdkmi--------dgtikegdavavvk 239 Thermoplasma acido...
Q9Y9H1    177 SLRMEVFYSVARRAIERGCAYVdncgregkellsrgeycptrdlgpednlelfekmleg------efyegeavvrmktdp 250 Aeropyrum pernix
Feature 1                                        #   #            ###  #  #                 # 
Q58772    234 tdikhknpsirdfpifrvektpHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAYIYKYFGwEMPEFI 313 Methanocaldococcus...
P95968    256 sdpdpsqidwvmlriidtaknpHPRVGSKYWVWPTYNFASIIDDHELGITHVLRAKEHMSNTEKQRYISEYMGwEFPEVL 335 Sulfolobus solfata...
O26157    239 tdlnhpnpairdwvsmriveaeHPRTGTRYRVYPMMNFSVAVDDHLLGVTHVLRGKDHLANREKQEYLYRHLGwEPPEFI 318 Methanothermobacte...
O29979    240 tdmrhkdpairdwvafriikesHPLVGDKYVVYPTLDFESAIEDHLLGITHIIRGKDLIDSERRQRYIYEYFGwIYPITK 319 Archaeoglobus fulg...
Q8ZU33    254 thpdpsvrdwvafriidtsktpHPLTGDKYIVWPTYNFAVSIDDHLMGVTHVLRAQEHSVNTIKQSYVFRHFGwEQPVTI 333 Pyrobaculum aeroph...
AAF97196  276 knpalrdwpalriqdtqknphpRPQIGSTYRVWPLLDFQSAVEDQLQGVTHIVRGKDLMDSTRKQTLLYEHFGwEYPETI 355 uncultured marine ...
NP_280054 255 dithknpalrdwvafrmvdtphPRDAASGYRCWPMLDFQSGVDDHRTGVTHIIRGIDLQDSAKRQRFLYEYFGwEYPEVV 334 Halobacterium sp. ...
Q8TT52    252 iehkdpalrdwgafrirkmshpRAEIGNKYVVWPLLDFAGAIEDHELGMTHIIRGKDLIDSEKRQGYIYKYFGwTYPKTT 331 Methanosarcina ace...
Q8TXB7    243 tevdhpdpavrewiafriveeeHPMTGSRYLVWPTMNFAVAVDDHLMNITHVLRGKDHESNTRRQKYVFEHLGwDTPEYV 322 Methanopyrus kandleri
O59314    246 dlnhpnpavrdwpalriidnpnHPRTGNKYRVWPLYNFASAIDDHELGVTHIFRGQEHAENETRQRYIYEYFGwEYPVTI 325 Pyrococcus horikoshii
Q9HJM5    240 tdlkhpnpsvrdwiafriiearHPRVDDKYRVYPMMSFSVAVDDHYLGLTHVLRGKDQLTNTDKQRYIFDYNGwKKPYYY 319 Thermoplasma acido...
Q9Y9H1    251 rhpnpslrdwvamriidtekhpHPLVGSRYLVWPTYNFAVSVDDHMMEITHVLRGKEHQLNTEKQLAVYRCMGwRPPYFI 330 Aeropyrum pernix
Feature 1        ##          #                                                                
Q58772    314 HYGILKIed--iVLSTSSMykgik--eglysGWDDVRLGTLRALRRRGIKPEAIYEIMKRIGIkqaDVKFSWENLYAINK 389 Methanocaldococcus...
P95968    336 QFGRLRLeg--fMMSKSKIrgml----ekgtNRDDPRLPTLAGLRRRGILPDTIKDVIIDVGVkvtDATISFENIAAINR 409 Sulfolobus solfata...
O26157    319 HYGRLKMdd--vALSTSGAregil--rgeysGWDDPRLGTLRAIARRGIRPEAIRKLMVEIGVkiaDSTMSWKKIYGLNR 394 Methanothermobacte...
O29979    320 HWGRVKIfe-fgKLSTSSIkkdie--rgkyeGWDDPRLPTLRAFRRRGFEPEAIKSFFLSLGVgenDVSVSLKNLYAENR 396 Archaeoglobus fulg...
Q8ZU33    334 HFGRLRIeg--aTLSKSKLkam-------riKYDDLTLPTLAGLRNRGIVPEAIWDLILSVGIkpsDSTVALANLFAFNR 404 Pyrobaculum aeroph...
AAF97196  356 YWGRVKVhe-wgGFSTSKMrasie--sgaytGWDDPRLPTLQGLQLRGIQAEALRNFWIELGVtqkDISVPLATLFSHNT 432 uncultured marine ...
NP_280054 335 HWGHVQLdaydvAMSTSTIkeria--ageleGWDDPRAPTMQSIRRRGIRGAAVVDAMVELGTsssDVELAMSAVYANNR 412 Halobacterium sp. ...
Q8TT52    332 HWGRVKIhe-fgKFSTSSLrkaie--ageysGWDDPRLPTIRAIRRRGIQAEALKKFMIEMGVgmtDVSISMESLYAENR 408 Methanosarcina ace...
Q8TXB7    323 HYGILKVeg--aVLSTSEIrrgid--sgeytGWDDVRVATLRALRRRGIKPEAIRETILEIGLtdvDATFSWEHLYARNR 398 Methanopyrus kandleri
O59314    326 HHGRLSIeg--vVLSKSKTrkgie--egkylGWDDPRLGTIRALRRRGILPEAIKELIIEVGLkksDATISWENLAAINR 401 Pyrococcus horikoshii
Q9HJM5    320 HYGMIKFpg--iKLKTSLMkkgil--sgqyeGWSDIRLGTVRAFAKRGYRPETFRRYWINSGLreiDAIFSIEIFDSINR 395 Thermoplasma acido...
Q9Y9H1    331 HFGRLKLeg--fILSKSKIrklleerpgefmGYDDPRFGTIAGLRRRGVLAEAIRQIILEVGVkptDATISWANLAAANR 408 Aeropyrum pernix
Feature 1              
Q58772    390 ELIDKDARR 398 Methanocaldococcus jannaschii
P95968    410 KKLDPVAKR 418 Sulfolobus solfataricus
O26157    395 SILEEEARR 403 Methanothermobacter thermautotrophicus str. Delta H
O29979    397 KIIDRKANR 405 Archaeoglobus fulgidus
Q8ZU33    405 KHIEPIADR 413 Pyrobaculum aerophilum
AAF97196  433 KRIDDDAPR 441 uncultured marine group II euryarchaeote 37F11
NP_280054 413 DLVDDTAPR 421 Halobacterium sp. NRC-1
Q8TT52    409 KIVDPVANR 417 Methanosarcina acetivorans
Q8TXB7    399 KMIDPESHR 407 Methanopyrus kandleri
O59314    402 KLVDPIANR 410 Pyrococcus horikoshii
Q9HJM5    396 EIVDPRAYR 404 Thermoplasma acidophilum
Q9Y9H1    409 KLLDERADR 417 Aeropyrum pernix

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