Conserved Protein Domain Family
GH64-GluB-like

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cd09220: GH64-GluB-like 
glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like
This subfamily is represented by GluB, beta-1,3-glucanase B , from Lysobacter enzymogenes Strain N4-7 and related bacterial and ascomycete proteins. GluB is a member of the glycoside hydrolase family 64 (GH64) involved in the cleavage of long-chain polysaccharide beta-1,3-glucans, into specific pentasaccharide oligomers. Among bacteria, many beta-1,3-glucanases are implicated in fungal cell wall degradation. GluB possesses the conserved Glu and Asp residues required to cleave substrate beta-1,3-glucans. Recombinant GluB demonstrated higher relative activity toward the branched-chain beta-1,3 glucan substrate zymosan A than toward linear beta-1,3 glucan substrates. Based on the structure of laminaripentaose-producing, beta-1,3-glucanase (LPHase) of Streptomyces matensis, which belongs to the same family as GluB but to a different subfamily, this cd is a two-domain model. Sometimes these two domains are found associated with other domains such as in the Catenulispora acidiphila DSM 44928 carbohydrate binding family 6 protein in which they are positioned N-terminal of a carbohydrate binding module, family 6 (CBM_6) domain.
Statistics
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PSSM-Id: 185759
Aligned: 19 rows
Threshold Bit Score: 473.718
Created: 2-Sep-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
substratecatalytic
Feature 1:substrate binding pocket [chemical binding site]
Evidence:
  • Comment:Based on sequence similarity to Streptomyces matensis, laminaripentaose-producing, beta-1,3-glucanase bound to laminaritetraose.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
AAN77504      32 FNLALLNASGq---NTAYAYVTGFDn---gRPLFVRaDGSAYYPPSPsap---vtPLGADCAIPLGANGSTVRVSVpr-m 101 Lysobacter enzy...
XP_002143322  65 LTLTITNNIA----GTVNCYVNGQNpnqnnAPVILTpDFSWYYPSAPstangvpaPISETIAIPLGAQGSSTTIKIpsyv 140 Penicillium mar...
XP_002557130  65 LSVSVYNNINs---NNIKVYVTGLDpn--rNLVLLTpNGTWYRPAESsdat-gpqKIKEDIAIPIGAYGTATPITLpthv 138 Penicillium chr...
EEU39666      95 LPLKLVNNFSg---GNVRAYISGLDsd--gTVVFIGaDGGLVYPRSGgskipveiTENIAIPLPPQGETLDFNIPIsm-- 167 Nectria haemato...
ADJ45264      36 LPLTLKNNSGg---GTVYAYISGSDta--gRPGFVTaDGRFQALPNPss----pvTPVPDYAIPLGGSGSQLTVTLtdyl 106 Amycolatopsis m...
ZP_05479193   33 AKVAFDDQSGa---SQTYAYLTGTTld--nRLVILKaDGTPYYPPSPgsd---htPLGEDCAIPLKSLSQVTVPKMy--- 101 Streptomyces sp...
YP_003134419  36 LRFRLVNNSG----ATAYAYITGQAda-dgRVMFVRaDGSVYHPTAGgpv---pePLGEDPAIPVNGSAEVMVPRMy--- 104 Saccharomonospo...
ZP_04706017   36 CELALENTSLs---GQVNAYVTGREla-tdRWIILRaDGSVFRPDSPaep---ntPLPADCAIPLPSAGSDPLVLTlpqm 108 Streptomyces al...
EEY20877       6 LDIVLKNNTTs---DKAYAHITGLDlnknnAVFILRaDGHSAYYPASpkd--ilkPLEADCNIPLGLRGSSTKVTIpq-i 79  Verticillium al...
EED21395      68 LPLQIVNNLAgsgsGAVNAYISGLDsn--nNVVFLQaDGSFYYPAGTtsa--vpvQITANIGIPIGAEGTTTTITIpdyi 143 Talaromyces sti...
Feature 1                                                       ### #     ### # ##               
AAN77504     102 yGARIYLVTGSRLDFYVnp----gpAVVHPSFLNtsDTNFNKNWTFAEFTFNe-yELFSNISYVDFVAAPLGLSLRslsg 176 Lysobacter enzy...
XP_002143322 141 iSARVWFAVGELQFFTVgnad-gtfSIVQPSQTNpaDPSAGINWGFIEFTYTaggGIYANISYVDFVGLPLGMSLTdtsg 219 Penicillium mar...
XP_002557130 139 sSGRIWVADGDLTFFTEvvgv-gilSLVEPSAVNpnDPSAAANWGFVELTTDs-sGITVNLSYVDFVGLPLGIEIQgs-g 215 Penicillium chr...
EEU39666     168 sSGRIYFADDDLHFFMVdig--ngdGLVQPSTNNlqDPSAGVNWGFVELTYTn-gVLYANISYVDFVGIVLGMMLSltdg 244 Nectria haemato...
ADJ45264     107 iGGRVWFSVDKKIQFFVnp----gpGLVQPGFTSs-DPNWQTNWTFCEFTYNs-aNLYANISYVDMVALPVSMATTga-a 179 Amycolatopsis m...
ZP_05479193  102 -AARIYVALDSKLDFFVnq----gpALVHPSFLAadDPNYNRNWSFCEFTFNn-dVLFANISYVDFVAIPLGLHLTttgs 175 Streptomyces sp...
YP_003134419 105 -GARVYFVTDDKLEFFTvqaadggtALVHPNFVSdaDPNFDKNWTFAEFTLNs-vQLYANISYVDFVAAPVGLHLVha-g 181 Saccharomonospo...
ZP_04706017  109 yGSRVYFVRDDTLDFYLnp----gpSLVEPAFASpdDPNYGRIWSFCEFTFNt-tQLYSNISYVDLVTALPIGITLeg-d 182 Streptomyces al...
EEY20877      80 aGGRIWFSLEGPLTFLLnp----gpAVVEPSATNpsDPNYNLNWGFCELTYNa-aQLYVNISYVDFVSLPIALQLEtddg 154 Verticillium al...
EED21395     144 sSGRVYLAVGTLQFFVVsngs-ggvGLVQPSATNpsDPSANTNWGFIELTNTaagGLYTNISYVDFIGLILGMSVTagdg 222 Talaromyces sti...
Feature 1                                                                                        
AAN77504     177 RVETIPGlpaASLDPICYSLQQQasqegsAWNSLIqrg-pdgRNLRAMSAHy---------qAARFQNYLAGYIDACWNK 246 Lysobacter enzy...
XP_002143322 220 AVQTALGltsDAVTSVCKDLTSQaqrdglPWDALCqti--ngAVIRVLSPNdyma----anpSSGFETYFDDYVNEVWSN 293 Penicillium mar...
XP_002557130 216 GTQTTPGvvkNALSSICNALAVQssldgqPWKELCmtn-nkgNILRVISPYnym-----alyPTAFDSYWTNYISQAWST 289 Penicillium chr...
EEU39666     245 STQTTAGlvaDAASKICDDMVKQkdadgrAWTFLCian-algDPIRVISPGnqy-----dlePITFEDYWTSYVDEVWNK 318 Nectria haemato...
ADJ45264     180 GAQSVSPlpdGALGSIADGLRAQhntdgaPWDRLVvtd-sagKVVRVLAPGh---------sPVDFGGYWTNYLNAVWDH 249 Amycolatopsis m...
ZP_05479193  176 GDQTVPGlpaRSLDPICAALNAQg----gKWGTLIetg-ddgKPLRALSAHy---------rADQFGGYLDGYLDEVWQK 241 Streptomyces sp...
YP_003134419 182 GTQEVAGlpdGAIDRIASALRDQg----gAWPTCVqev--ngTVFRVLNPNh---------rAGDFAGYMDEYVDQVWQK 246 Saccharomonospo...
ZP_04706017  183 GTHDVAPmpdGAVDRIAADLEAQaqadgqPWDQLVirg-ddgKVLRVVSPQaimapwfgepdKMPFKDVWEPYIDQVWEK 261 Streptomyces al...
EEY20877     155 KVTTVPGfpaNALDAVCDALVAQdtddkaGWSRLVvraadgkANLRALSPNsam-----vmnPDLLNTYFQSHVDSVWKK 229 Verticillium al...
EED21395     223 SVQTALGlksDAVNTICTALAAQtasdgyPWASLCqtd-tsgKYLRVLSPNdyv-----stdSSAFSDYWTSYVSQVYSK 296 Talaromyces sti...
Feature 1                                                         ##                             
AAN77504     247 YrgtTLTVDTQsg-fGVLTARVGGdnLLRFn----nGEAFAKPSTADVLSCdSGPFSLGgase--vrkAIIPRLAAALNR 319 Lysobacter enzy...
XP_002143322 294 YtstTLTINTQnn-aGNVSCTVSGd-TLECdg---dGINYSKPSTADIFGCnSGPFVTNpsdt-pvhqATIPRLCAAFNR 367 Penicillium mar...
XP_002557130 290 YedaPLTVDTQas-aGLVNCTVSSg-ILTCag---dNRGYPQPVASDIFGCnSGPFELEasdn-avhqAVVPRLCAAINR 363 Penicillium chr...
EEU39666     319 YstqPLTINTQte-aGSVSCRVSGe-ELVCdg---dNRGYAKPNTKDIWGCnSGPFAIIegdn-aihtAVVPRLCAAFVR 392 Nectria haemato...
ADJ45264     250 YrttPLTINGQgg-iGSYTGTVSGd-AIVFaglntnGVPFTKPSAVDIFGCaSGPLYNSgsd---argAVAARLAAALNR 324 Amycolatopsis m...
ZP_05479193  242 YtseTLTVDTQvpglGAFTGQVGAdgVLAFn----nGERFAKPATPDVWSCdSGPFAIKqgds-darkAIIPRLAAALNR 316 Streptomyces sp...
YP_003134419 247 YanePLFIDSQrgdiGILEGRVEGd-DLVFg-----AERFGRPTTGDIWGCnSGPFANNpdtdseerkAIVPRLAAAFNR 320 Saccharomonospo...
ZP_04706017  262 YaneDLKIDLQgg-rGVFTGRVQGd-VLTFn----gGHEFVRPVSRDIFTCdHGPFTNDpnds-dekkGLLARLAAGFNR 334 Streptomyces al...
EEY20877     230 YrdnDLVVHTQae-wGDVKGRVGGddKLTFe----gIGSFARPSTRDIFGCsSGPFAGYpadkaaamgNIGARLAAALNR 304 Verticillium al...
EED21395     297 YsssPLTINTQaa-aGDVTCTSGGstHLTCqg---sDVTFAQPSAADIFGCnSGPFAVTgna---vdaAIVPRLCAAFNR 369 Talaromyces sti...
Feature 1                                                  #  ##              #              
AAN77504     320 TTLLDNpnq--pnGEVASRFYRnaqTNHYARLVHERLpdnRGYAFPYDDVTasgg-pdfSGAARSGDPdTLTVTLR 392 Lysobacter enzymogenes
XP_002143322 368 GTLLVAggd-vqpSLGADSYYTtapSNYYSAIVHKYEidgKGYAFAYDDVNpsgndenaSGTVSSANPsILSVTVG 442 Penicillium marneff...
XP_002557130 364 STLLLGggn-vqpRLASTHYYTvspTNYYSKFVHQHEsrgKGYAFAYDDVTadda-pnaSGLLSDPNPtLLTITIG 437 Penicillium chrysog...
EEU39666     393 STLLVDggd-vqpSLGADSYYKndpTNHYSRIVHSYEvdgRGYAFPYDDVNpdg--nenASGVVSGTPnTLTIYVG 465 Nectria haematococc...
ADJ45264     325 SSLLVAggnnqpdGVAPSQYYRdatTNHYARLVHQYAs--IGYAFPYDDVGptga-qpvDGHLQDPAPtSWTVALG 397 Amycolatopsis medit...
ZP_05479193  317 TTLRDNpkq--ptGEDPARFYQnpeTNHYARIVHSKLpdnRGYAFPYDDVSpgp---dfSGAVQAGDPdTLTITVN 387 Streptomyces sp. AA4
YP_003134419 321 TTLLINseq--phGEDPATFYQhpvTNHYARVVHENLpdgKGYAFAYDDVSsnpn-edhSGKVNHGDPeLLTVTLG 393 Saccharomonospora v...
ZP_04706017  335 STLLTHpd---qpGGGADDYYRdpvTNHWSRVVHANSp--IGYAFPYDDVRpdge-pdvSGAAHDDNPvRFTVRVG 404 Streptomyces albus ...
EEY20877     305 STLLSNgrq--peDEKVEAYYQepeTNHYSRICHEVSlegRGYAFPYDDVGpang-hdqSGCLFDSNPkVLTVTVG 377 Verticillium albo-a...
EED21395     370 GTLLLSggd-vqpSLGADSYYTvspCNYYSKFVHENEvdgKGYAFSYDDVNpdg--enaSGELVTTNPtALIITVG 442 Talaromyces stipita...

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