Conserved Protein Domain Family
PLDc_unchar2_2

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cd09130: PLDc_unchar2_2 
Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins
Putative catalytic domain, repeat 2, of uncharacterized phospholipase D (PLD, EC 3.1.4.4)-like proteins. PLD enzymes hydrolyze phospholipid phosphodiester bonds to yield phosphatidic acid and a free polar head group. They can also catalyze transphosphatidylation of phospholipids to acceptor alcohols. Members of this subfamily contain two HKD motifs (H-x-K-x(4)-D, where x represents any amino acid residue) that characterizes the PLD superfamily. The two motifs may be part of the active site and may be involved in phosphatidyl group transfer.
Statistics
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PSSM-Id: 197228
Aligned: 20 rows
Threshold Bit Score: 219.037
Created: 17-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Conserved Features/SitesClick to see Conserved Features Help
 
putative activeputative
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on similarity with phospholipase D, which functions as a bi-lobed monomer with two catalytic domains. Each domain carries one copy of the conserved HKD motif and two domains form a single active site.
  • Comment:The HKD signature motif (expanded to H-x-K-x(4)-D-x(6)-G-S-x-N, where x represents any amino acid residue) characterizes the PLD superfamily.
  • Comment:Most residues in the HKD motif are part of the active site.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                          
ZP_01171328    294 LTEGKILKHILQEIDesrkGDIIWLGMFYLADRDVIGGLEEAAdRGVQINLVFDPNqnafgseKTGLPNIPVASELeklg 373 Bacillus sp. ...
jgi:Sterm_2273 283 ITELKVGEALDRDIKatraGDKIQIGMYFLSDKEVIKHLIDAAnRGVEIRMILDRNkdafgmdTNGLPNKPVAKEImkkt 362 Sebaldella te...
YP_003425599   281 ITEGRIYERTLELIEeaesGDELWFAMFYLSDRDVINSLIDASnRGVQVRLVLDPNkdafgqeKVGLPNRPVAAELle-- 358 Bacillus pseu...
YP_003597735   285 LTEGKIYKHVLHDLRhakkGDDVWLGMFYLGDRDVIKALLKASkQGANVRLILDPNenafgrkKFGLPNRPVAAELvkks 364 Bacillus mega...
YP_003245942   323 LTEGKIYKYVLEGIEqsqpGDTLWMGMFYLADSKVMERLLQASdRGVDIRLILDPNqnafgrdKIGIPNRPAAAELiqks 402 Geobacillus s...
ZP_01861244    291 LTEGKIHKRALEELGkagkGDTVWLGMFYLAERKVINRLIDAAeRGADVRIILDPNtnafgqqKMGLPNIPVASELhrrg 370 Bacillus sp. ...
ZP_04432355    289 LTEGKVYDRMMKEIKatkkGDSISMAMFYLADRKVVRALEKASsRGVRIRLILDPNlnafghkKIGLPNQPVAQELvkkt 368 Bacillus coag...
YP_002887141   296 VTEGKIQESVLDAMNgaddGDTIWIGMFYLADRNIIQAIEDAAgRGVKVNLILDPNtnafgrsKSGLPNLPVTAELntvn 375 Exiguobacteri...
ZP_05900702    359 VTEAKIGEHLDKDIDsaraGDEILMGMYFLADKGVVDRLIKAAnRGVKVRIIFDRSrdafgmsTNGLPNKPVSKKLkkkt 438 Leptotrichia ...
ZP_06291847    283 ISEGEIFNAIYKNINetkaKDQIKIGIFYLSEFRILKALGQASnRGVDVKIVADLNkdafgikKNGCPNRPALSELkke- 361 Peptoniphilus...
Feature 1                          # #                # #           #                            
ZP_01171328    374 keNISIRWYNTdeEQYHPKLMFIQkk-tdSVLIGGSANFTKRNLdDLNLETDMKIaapndtpVMKDADAYFKRIWENE 450 Bacillus sp. NR...
jgi:Sterm_2273 363 knKVQIKWYFTngEQFHTKYMKIEkkngtVIINGGSSNFIRKNIrGFIMDANLRIitdaeapINLEMNDYFERLWNNE 440 Sebaldella term...
YP_003425599   359 egQIEVRWYDTigEQFHPKLMARIte-dqTTVIGGSANFTSRNLrDYNLETNLWVkapneqeFSQDITSYFERVWNNE 435 Bacillus pseudo...
YP_003597735   365 kgDIKVRWYHTgkEQYHPKTLFIRne-knATIIAGAANFTKRNLaDLNLETDIKVsgpsnkkVMTELNAYFDRLWINK 441 Bacillus megate...
YP_003245942   403 qgKISIRWYNTgtEQYHTKLMYIAkptgkSIITGGSTNFTQRNLdDLNLENNLWIaapqnhpLTRDLDRYFHRIWFNE 480 Geobacillus sp....
ZP_01861244    371 keNIHIRWYNTemEQYHTKLLYIKkk-ekAIILGGSTNYTTRNFeDLNLETNLWLetpldqeVNKEVETYFNRIWDNE 447 Bacillus sp. SG-1
ZP_04432355    369 dgKIKIRWYNTglEQFHPKLVWIEkp-grSLFFGGSTNLTLRNLdDYNLETDLFVkapndaaITKEIRRYFGRLWNNE 445 Bacillus coagul...
YP_002887141   376 peQIEIRWYDVgkEQYHPKILYVDge--eKTVVLGSGNYTTRNMnDYNLEADVEVtgdvdtaFFDEVDEYFNRLWNNE 451 Exiguobacterium...
ZP_05900702    439 knKIEVKWYFTnnEQYHTKITLIKktdgnVIIHTGSANLIKKNIrGYIMDANFRIltnnnskLTKDIYTYFDRLWENK 516 Leptotrichia ho...
ZP_06291847    362 hpKINIRWYKTtgEQFHTKIAYFSykdkdPRLILGSANFTRRNLdNFNLETDVEIkmnknsaLISKFENYYDRIWNNI 439 Peptoniphilus l...

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