Conserved Protein Domain Family
INPP5c_Synj1

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cd09098: INPP5c_Synj1 
Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1
This subfamily contains the INPP5c domains of human synaptojanin 1 (Synj1) and related proteins. It belongs to a family of Mg2+-dependent inositol polyphosphate 5-phosphatases, which hydrolyze the 5-phosphate from the inositol ring of various 5-position phosphorylated phosphoinositides (PIs) and inositol phosphates (IPs), and to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. Synj1 occurs as two main isoforms: a brain enriched 145 KDa protein (Synj1-145) and a ubiquitously expressed 170KDa protein (Synj1-170). Synj1-145 participates in clathrin-mediated endocytosis. The primary substrate of the Synj1-145 INPP5c domain is PI(4,5)P2, which it converts to PI4P. Synj1-145 may work with membrane curvature sensors/generators (such as endophilin) to remove PI(4,5)P2 from curved membranes. The recruitment of the INPP5c domain of Synj1-145 to endophilin-induced membranes leads to a fragmentation and condensation of these structures. The PI(4,5)P2 to PI4P conversion may cooperate with dynamin to produce membrane fission. In addition to this INPP5c domain, these proteins contain an N-terminal Sac1-like domain; the Sac1 domain can dephosphorylate a variety of phosphoinositides in vitro.
Statistics
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PSSM-Id: 197332
Aligned: 3 rows
Threshold Bit Score: 754.954
Created: 3-Jun-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative catalytic site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #                                                 #                     
O43426        533 IRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDaPKLAGIQEFQDkrskPTDIFAIGFEEMVELNAGNIVsASTTNQKLWA 612  human
XP_416706     533 VRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDaPSIAGIHEFQDrrskPVDIFAIGFEEMVELNAGNIVnASTTNQKLWA 612  chicken
NP_001007031  538 IRVCVGTWNVNGGKQFRSIAFRNHTLNDWLLDaPKKARHPEFQDvknnPVDIFAIGFEEMVELNAGNIVsASTTNQKLWA 617  zebrafish
Feature 1                                                                                     #   
O43426        613 VELQKTISRDnKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGAtGNKGAVAIRMLFHTTSLCFVCSHFAA 692  human
XP_416706     613 AELQKTISRDyKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGAtGNKGAVAIRMLFHTSSLCFVCSHFAA 692  chicken
NP_001007031  618 AELQKNISRDqRYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGAtGNKGGVAIRMLFHTTSICFVCSHFAA 697  zebrafish
Feature 1                                              # #                                        
O43426        693 GQsqVKERNEDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKnaGQVFRG 772  human
XP_416706     693 GQsqVKERNEDFIEIARKLSFPMGRMLFSHDYIFWCGDFNYRIDIPNEEVKELIRQQNWDSLIAGDQLINQKnsGQIFRG 772  chicken
NP_001007031  698 GQsqVKERNDDYNEIARKLSFPMGRLLYSHDYVFWCGDFNYRINIPNEEVKELIRQQNWDALIGGDQLVEQKnaGQVFRG 777  zebrafish
Feature 1                                          #                                              
O43426        773 FLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWpFDRSAEDLDLlnasfqdeskilYTWTPGTLLHYGRA 852  human
XP_416706     773 FLEGKINFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWpFDRSAEDLDLlnasfhdnskvpYTWNPGTLLHYGRA 852  chicken
NP_001007031  778 FIEGKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWKRRKWnFDKTAEELELnvvgapvneeeqYPWSPGDLKYYGRA 857  zebrafish
Feature 1              ##         
O43426        853 ELKTSDHRPVVALIDI 868  human
XP_416706     853 ELKTSDHRPVVALIDI 868  chicken
NP_001007031  858 ELKTSDHRPVVAIIDV 873  zebrafish

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