Conserved Protein Domain Family
Aldose_epim_Ec_c4013

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cd09023: Aldose_epim_Ec_c4013 
Aldose 1-epimerase, similar to Escherichia coli c4013
Proteins, similar to Escherichia coli c4013, are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Statistics
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PSSM-Id: 185700
Aligned: 48 rows
Threshold Bit Score: 236.358
Created: 2-Aug-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
active sitecatalytic
Feature 1:active site [active site]
Evidence:
  • Comment:based on homology to other members of the superfamily

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
YP_643318     52 SFDVLVDR--AFDIGRCEFgGRSLCWLSgvgtsgpwfye--peglgffrtfgGGMLTTCGLDhtlfmaedtaeqyhyppk 127 Rubrobacter xyl...
NP_624689     51 SFDVLVDR--AMDLGGAEFeGRGFGWRSatgfrhpglheyrdddglsmmrsfSGLLLTAGLDhtlfgaevdasqyryppr 128 Streptomyces co...
YP_674163     51 MFEVQVDR--AMDLSRMNYlGVPIGWDSpadlrspwlhefdaedgfswarsfSGLMNSCGLDhihapetdsaahfnhppr 128 Mesorhizobium s...
YP_003409646  52 SFEVLLDR--ALDIGWADArGIPLGWRGprgrasatrye--pagagwcqtfgGGLLSTCGLAstgaas----------tv 117 Geodermatophilu...
ZP_02140575   44 AADIALDR--GGDLLRLSWkGREVGWHSaamaphpspntd-aehglgflrgfDGFIVTCGLDhhglpaetsaddacyppr 120 Roseobacter lit...
NP_396670     43 AFEVALDR--GFDISSLSFrGTNIGWNSptqmrfpmvdpg-seggwafmrnfDGFLVTCGLDhisrplevdiahynhphl 119 Agrobacterium t...
YP_002883721  52 HARLLLDR--GMDLGRAWFaGQPISWTAapgprsrgyad---ddqgwhlgweGGLVTTCGLQnvgs-------------- 112 Beutenbergia ca...
YP_003203246  41 DLEVLPDR--GFDIGAACYsGWPLAWVSpvadarpldvp---agdawlarfaGGLLTTCGPEnigp-------------- 101 Nakamurella mul...
YP_002550130  10 IVELDPTS--VLDIRTLIIdGVDLSPHRaipddgd----------pridhslEGFLFTCGPDhirhpepi-------gdg 70  Agrobacterium v...
NP_355094      9 SPRIFLDEtsVFDIGACVVnGIDIAPGRaipddgd----------aridhslEGFLFTCGPDhirhpepi------egdv 72  Agrobacterium t...
Feature 1               #                                                                        
YP_643318    128 rterYGLHGRVSNLPARLVGyger--wegeGCVLWAEGevlqaavFGERLLLRRRVEArvg---esRITVRDEVENagfd 202 Rubrobacter xyl...
NP_624689    129 gtavHALHGRVANLPARLTGygerwqedgrCVLWAEGEvrq-aaiFGEHLRLTRRIEAdlg---gsEIRLTDRVRNagfd 204 Streptomyces co...
YP_674163    129 peitFPLHSRISYTPALLTGygvrw-egerAFLYASGEvrq-atvFGENFLLARRIEVevg---tnCVIYTDTVRNlsyn 203 Mesorhizobium s...
YP_003409646 118 dgvhHGLHGRVGHLPAENVTwrlve-drgdLAVSVTGDvve-aalGAPTLRLQRRIVAscv---epTVRVEDVVTNdsst 192 Geodermatophilu...
ZP_02140575  121 dvhvHPLHGRISTARADLVTkeid---wqaGEIVIRLVirq-tsvFGENFELQRDYRFale---qgDIILTDRVTNrgfr 193 Roseobacter lit...
NP_396670    120 ktksMPQHGRISTEKARLVGydvd---pesGEIFCEGIvrq-asvFGENLELRRRITLpvf---gqALRIDDTVTNrgfr 192 Agrobacterium t...
YP_002883721 113 padgHGQHGRFTENPAERVTvsgg---agdGRLVVTGVvhe-nngIGRLLRVDRTWTFhlg---sgLVELEDVTRNespr 185 Beutenbergia ca...
YP_003203246 102 ptgrAGLHGSHSHRPGRPVElrsgv-rdgrPFVLLAGTvdy-aavLGPTARLDRVIEStvdergraVLRVADEIVNegpg 179 Nakamurella mul...
YP_002550130  71 sdrrYPLHGSFSSHPARIIDqsdt---ecrAEIPVRHA-------DGGQSLLTRHWRIdaq---tgAVALRDRITNsgha 137 Agrobacterium v...
NP_355094     73 egrrYPLHGSFSSHPATIIAfdvhe-tnalARVEVPVKl-----aDGGTALLERTWRIdge---sgEVSLDDRVVNtsdr 143 Agrobacterium t...
Feature 1                # #                                                   #                 
YP_643318    203 ptphMYLYHVNVGFPVVdegAELLApa--------vsVTPRgdypaegy----grfhapeeGYVERVFEHelaae-eggt 269 Rubrobacter xyl...
NP_624689    205 ptphMYLYHVNVGWPFLdegARYELpp---------hRTLWrsdsvaeqgvshtampaplpGFVEQVYEHelepd-aagl 274 Streptomyces co...
YP_674163    204 tvphAYLWHINLGWPLLnagSRLVSpi---------sETPWslragednesgafeqagprhPTTQQVFDHhvrle-adgt 273 Mesorhizobium s...
YP_003409646 193 vaghMFRHHLNLGYPVVgdgSLVHSmatlv--gernsTAPTdatfpms-------lavasgPSPERVLYGrsp-----ss 258 Geodermatophilu...
ZP_02140575  194 parhGILYHVNVGFPVLcetARLTGehwelaklmemgALPKd-------------------DHVENVDVApsp-----pd 249 Roseobacter lit...
NP_396670    193 psghAIIYHLNYGYPFLdqnLEITGlpell--aaklvVDPPrp----------------sdDYGEYVDSVdslei--pea 252 Agrobacterium t...
YP_002883721 186 avqaPVLYHVNVGYPFLgpaSEVATrg--------dgDAVVstmg-------------epeDAADDVVELdvdad-degw 243 Beutenbergia ca...
YP_003203246 180 pfpaAVLYHVNLGAPLVrpgTAIRWpg--------trRTERepcpavpdp---stmpeptdQLTESVVAHtgprvdpdgr 248 Nakamurella mul...
YP_002550130 138 pfpaMLMYHMNVAAKLFddaVRMEGaml------degGFGWrfgaepg-------gvfcvaANGDTAGADgwae---frl 201 Agrobacterium v...
NP_355094    144 pipvFLMYHMNIGARLFddaVRLEGamm------dggGHGWrfgeepg------nvfcvsaGKSEWAELKl--------- 202 Agrobacterium t...
Feature 1                                              #         #                               
YP_643318    270 vPVAVVNrrlgl-------gvyqlYDRNQFPHHfVWRMLGegtYVVGIEPStnrtagrldarrrGELIRLraGERRAYGM 342 Rubrobacter xyl...
NP_624689    275 aRPRLVNerlgv-------yfeleFDTVRFPSFfQWLHLRegaYAVGFEPSthhvqgeaaaredGSMTFLapGEEREYTT 347 Streptomyces co...
YP_674163    274 aRAALINddfqhpcgstglaleiaYDGRAMPALfQWQFFQsgnYVMAIEPStthagsradwharKEFKMLghGESASYRL 353 Mesorhizobium s...
YP_003409646 259 ePSGVVEatapdgs----atvrvtYGTDTFPMLvLWRDATagvNVLGIEPStsrdsgraqaerdGEVCWLqpGESRSYRT 334 Geodermatophilu...
ZP_02140575  250 gQIGLRGggvd---------lslrYDPSCLPVTaLWRAFQsgtYALGLEPQtdl-------sdkGTALLAa-GEERGYRL 312 Roseobacter lit...
NP_396670    253 dPIVVSNreldi-------svgltFTRDQLNKLaIWRAYQsgvFALGVEPRtdl--------aqDRPLLLp-GESCKNSL 316 Agrobacterium t...
YP_002883721 244 aAATVTSprlgm-------satirWLSATLPRVhRWRRRApgaYVMAIEPAncgvggaahdraqGCAPILepGTDRTTRL 316 Beutenbergia ca...
YP_003203246 249 vRVHVIApdglt--------vevaWTADTLPYSyQWTVPTrrrWALGIEPAsaplfgpdraaadAGIPAVpmGTVRRHEL 320 Nakamurella mul...
YP_002550130 202 gPIASVGgltl----------vvrFDTASLPFLqIWRNQQapaNVVGIEPVshrwvgredlakgGELDLLapGESREFGL 271 Agrobacterium v...
NP_355094    203 gPIAAIGgktl----------tvgFRTETLPYLqIWRNQQdpaNVLGIEPVshrwvgrreleaaGEFNILqpGESRSFGL 272 Agrobacterium t...
Feature 1         
YP_643318    343 E 343 Rubrobacter xylanophilus DSM 9941
NP_624689    348 A 348 Streptomyces coelicolor A3(2)
YP_674163    354 E 354 Mesorhizobium sp. BNC1
YP_003409646 335 E 335 Geodermatophilus obscurus DSM 43160
ZP_02140575  313 H 313 Roseobacter litoralis Och 149
NP_396670    317 Q 317 Agrobacterium tumefaciens str. C58
YP_002883721 317 S 317 Beutenbergia cavernae DSM 12333
YP_003203246 321 T 321 Nakamurella multipartita DSM 44233
YP_002550130 272 D 272 Agrobacterium vitis S4
NP_355094    273 R 273 Agrobacterium tumefaciens str. C58

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