1ZGH


Conserved Protein Domain Family
FMT_core_like_1

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cd08821: FMT_core_like_1 
Click on image for an interactive view with Cn3D
Formyl transferase catalytic core domain found in a group of proteins with unknown functions.
Formyl transferase catalytic core domain found in a group of proteins with unknown functions. Formyl transferase catalyzes the transfer of one-carbon groups, specifically the formyl- or hydroxymethyl- group. This domain contains a Rossmann fold and it is the catalytic domain of the enzyme.
Statistics
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PSSM-Id: 187723
Aligned: 10 rows
Threshold Bit Score: 260.715
Created: 19-May-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 23 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #   ###                                       ########    #      ####      
1ZGH_A        32 NIIIATTKSWNIKNAQKFKkeneskYNTTIITNKDELtfEKVKLINPEYILFPHWSWIIPKEIFENFTCVVFHXTDLPFG 111 Clostridium the...
YP_263952      2 NYIVAAIGEWNKALFDEYVvk--lsGNWAYVSTPTELkaKLATGFDPKYIFFLHWRWIVPVQILSEFECVCFHMTDVPYG 79  Psychrobacter a...
YP_284472    190 QYIVASCKAWHRPGFEALQre--tpGDWTWVSCPSELm-AALEHQSPSYIFFLHWSWLVPKDVWSRYECVCFHMTDVPYG 266 Dechloromonas a...
ZP_01038971    4 RIAIATPHARYDALTKALDqs--ddYDVLRIREKNDLsrDALEQFGCDWVFFAHWSWIVPAEIHENFRAVIFHMTDLPYG 81  Erythrobacter s...
YP_862050      3 NYIVLSEKVWHEEIYFKLKnnf-peFKWTLIKERNDFsyEELKKLEPEKIFIPHWSYIIPAKIFENFECVVFHMTDLPYG 81  Gramella forset...
YP_001839406   3 EYIVAAVGKWNRELFEHESkl--ipGKWKFVDSPESLd-LVLADSNPRYIFFPHWRWIVPPRILNQYECICFHMTDVPYG 79  Leptospira bifl...
YP_002127199   2 RIVICNSKTWFELRPEISAi-----HDVLNIETKSDLslDVLTNFQPELIFFPHWNWLVEKQIFTKFTCIVFHVAPLPYG 76  Alteromonas mac...
YP_002575890   2 NIIIATHKEYDIKNLDFLKekf-enINFYLITQKDQLniNFIEKIKPSYIFFSHWSFFIPKDVYENYKCIVFHLGDLPFG 80  Campylobacter l...
ZP_05069987    3 QIIIISKKKWDNSNYNLLKn-----NKEFILLDNINL--KKINQVNPRIIFFIFWSKIIPKKVFSNFLCIQFHSSDLPKF 75  Candidatus Pela...
ZP_05898806    2 HMVIVSNRAWNRRFVPEIEtr--tgIKVTYLEQRDDVsqEKMTALSPSWVFFPHWSYIIPAEVYENFRCVIFHMTDLPFG 79  Selenomonas spu...
Feature 1         #                   # ##  ##                                                   
1ZGH_A       112 RGGSPLQNLIERGIKKTKISAIKVDggIDTGDIFFKRDLDLYGT-AEEIFXRASKIIFnDXIPELLTKRPVPq-kQEGEA 189 Clostridium the...
YP_263952     80 RGGSPLQNLIVRGHKDTVLTALKMEkgLDTGPVYLKEAFNLAGS-AEAIYNRASQTAW-DMIKNIIANEPQPi-pQQGDT 156 Psychrobacter a...
YP_284472    267 RGGSPLQNLIAAGHTETKLSALRMLaqMDAGPVYAKRPLHLNGR-AEDIYLRAGALSF-ELISWIVDQKPEPl-eQQGGP 343 Dechloromonas a...
ZP_01038971   82 RGGSPLQNLIARGHEQTKLSALQCEagLDTGPIYLKRDLSLAGT-AEDIFERAAQLML-PMIREMVEQDLKPv-aQEGEP 158 Erythrobacter s...
YP_862050     82 RGGSPLQNLIVRGHTHTKISALKVEegLDTGPIYLKKDLQLLGT-AQEIFIRTTTIVE-KMIGEIIENDLSPi-kQDGEI 158 Gramella forset...
YP_001839406  80 RGGSPLQNLIIRGHKETVLTALRMEkgLDTGPVYMKLPLDLKGS-AEEIYTRTSALTW-KMISEFVTNEPKEt-pQEGEP 156 Leptospira bifl...
YP_002127199  77 RGGSPIQNLIKRGFTSSPVCALKMAggIDDGPIYDKEEISLKGT-LSEILANLNSVVN-KLIFQLINHLPTPi-eQSGEA 153 Alteromonas mac...
YP_002575890  81 RGGSPLQNLIIRGIYESKICALKVNeiLDGGDVYLRYAIKFHRLkAQKIYEKISKIIYeKMIPKILTSNIKPi-kQKGKV 159 Campylobacter l...
ZP_05069987   76 KGGSPIQNQILKKIYKTKISAFKINnkIDSGDICMKSNISLTGK-AENIYKNIEKKSL-GMILKLSKKKKISfkkQTGKS 153 Candidatus Pela...
ZP_05898806   80 RGGSPLQNLIVRGIYETKITALRCVkeLDAGPVYIKRPLSLWGS-AEEIYLRAGEITK-EMIIELVQKNPVPh-aQMGEG 156 Selenomonas spu...
Feature 1                                                                  
1ZGH_A       190 TVFQRRKPEQSEIspdfd--lekiYDYIRXLDGEGYPRAFIKYGKYRLEFSRASXKNG 245 Clostridium thermocellum ATCC 27405
YP_263952    157 VNFQRRTPKQSEIpndlt--veqlYDYIRMLDAPGYPKAFIDKGSYQLEFDQAELATN 212 Psychrobacter arcticus 273-4
YP_284472    344 LTFKRRTPDQSVLpsqga--ldklYDHIRMLDAPGYPLAFIEHGAFRICFSNAELKNG 399 Dechloromonas aromatica RCB
ZP_01038971  159 VIFKRRTPDQSAIdgeaa--ldavYDHIRMLDAEGYPHAFIETGNLRIELTKAEREDD 214 Erythrobacter sp. NAP1
YP_862050    159 VEFKRRKPKDGNMadlqq--vleiYDHIRMLDCDGYPLAYIESEHFRFEFSRASLQSK 214 Gramella forsetii KT0803
YP_001839406 157 VIFKRRKPEESELpetle--lekiYDFIRMLDADGYPNAHINFGKYQLKFNQAKYFDG 212 Leptospira biflexa serovar Patoc stra...
YP_002127199 154 ETFKRLGYEDNKIscean--igefYNAIRMLDDSSYPSAYLSFKKVNIEFSNVKKENG 209 Alteromonas macleodii 'Deep ecotype'
YP_002575890 160 VVFKRRTPKESNIntikkinltklYDFIRMLDAKDYPSAFLELKNIKIHFKDAKFKNN 217 Campylobacter lari RM2100
ZP_05069987  154 SFYYRRNSYQSNLsyvinkklvdiFDFIRMLDASNYPKAFYKLGNKKIELTDVSLNNQ 211 Candidatus Pelagibacter sp. HTCC7211
ZP_05898806  157 LAFKRRTPADGNIgnled--lsqvFDYIRMLDADGYPPAFLQMNHLRMEFSRASLKDG 212 Selenomonas sputigena ATCC 35185

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