Conserved Protein Domain Family
Death_UNC5C

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cd08799: Death_UNC5C 
Death domain found in Uncoordinated-5C
Death Domain (DD) found in Uncoordinated-5C (UNC5C). UNC5C is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5C plays a critical role in the development of spinal accessory motor neurons. Methylation of the UNC5C gene is associated with early stages of colorectal carcinogenesis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Statistics
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PSSM-Id: 260064
Aligned: 4 rows
Threshold Bit Score: 184.827
Created: 18-Feb-2010
Updated: 20-Aug-2013
Structure
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Aligned Rows:
 
dimer interface
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Comment:based on the structure of UNC5B DD homodimer

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                         ## ##         #  ##  ##                        
CAF99225     859 IPVSIRQKLCGSLDapqtrgNDWRMLAHKLNLDRYLNYFATKsSPTGVILDLWEAQhfpdgNLSRLAQVLEEMGRHDSLV 938  Tetraodon nigr...
AAO67275     844 IPLPIRQKLCSSLDapqtrgHDWRMLAHKLKLDRYLNYFATKsSPTGVILDLWEAQnfpdgNLSMLAAVLEEMGRHETVV 923  chicken
NP_001093454 866 IPLSIRQKLCGSLDapqtrgNDWRMLAHKLNLDRYLNYFATKsSPTGVILDLWEAQhfpdgNLNRLAAVLEEMGRHEGII 945  zebrafish
O95185       844 IPLPIRQKLCSSLDapqtrgHDWRMLAHKLNLDRYLNYFATKsSPTGVILDLWEAQnfpdgNLSMLAAVLEEMGRHETVV 923  human
Feature 1           
CAF99225     939 PAV 941  Tetraodon nigroviridis
AAO67275     924 SLA 926  chicken
NP_001093454 946 AEH 948  zebrafish
O95185       924 SLA 926  human

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