2ZF9,4IU2


Conserved Protein Domain Family
Type_III_cohesin_like

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cd08759: Type_III_cohesin_like 
Click on image for an interactive view with Cn3D
Cohesin domain, interaction partner of dockerin.
Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. Two specific calcium-dependent interactions between cohesin and dockerin appear to be essential for cellulosome assembly, type I and type II. This subfamily represents type III cohesins and closely related domains.
Statistics
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PSSM-Id: 260086
Aligned: 14 rows
Threshold Bit Score: 115.235
Created: 22-Apr-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
dockerin
Conserved site includes 19 residues -Click on image for an interactive view with Cn3D
Feature 1:dockerin binding interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                            #   #                             ## ## ### 
2ZF9_A        32 PTLSITKKtlta--aeapNAKVTXELSVEGAadKYAATGLHIQFD-PKLKLIPded-gaLATAGRAARLLEL-KKAEADt 106  Ruminococcus f...
4IU2_A        33 PVLEVTKKvfdta-adaaGQTVTVEFKVSGAegKYATTGYHIYWD-ERLEVVAtkt-gaYAKKGAALEDSSL-AKAENN- 107  Ruminococcus f...
CAO00732      52 PTISLTQEtltld-eakaNPTRTIELKVTGAdrKYAPTGLHIQFD-SRLKAVKded-gfIAAIGTAGSRLSQ-EQQPDGd 127  Ruminococcus f...
ZP_06644464 1257 GNMLFIPSves----vkaGEKFTVDIYGDSMk-NVNGLGALVFYDpAMIKDVKt----sQNPYIASMENMSI-DTPFDDg 1326 Erysipelotrich...
ZP_01969204 1252 GEAMLLASsds----vkkGETFTIDVYAQNVa-GLNAFGQVINYDnSKVQYVSc----eVSPLLAQMENLTA-NKEYDDr 1321 Ruminococcus t...
ZP_02077903 1255 GNALLLPSats----vnaGDTFTIDVYAEDVk-NLNAIGQVINYDpSKLEFQKa----eQSALIAQMEDLTV-NKTYDSd 1324 Eubacterium do...
NP_561962   1174 GEMMLVPSkse----iksGETFTIDLVGTGLs-DINAFSAEIPLDsTKYEYIKt----eGTVSTSGMKNLSK-ARVHTDn 1243 Clostridium pe...
NP_815521   1204 GGLSLAVVnengkdtylpGDTLTFILKGQDLk-NINALSTKMSFDsSKFELVGqp---aTTNNTQQMENYSK-YRKHSNd 1278 Enterococcus f...
ZP_02077900 1276 GVLSAVPSkqn----vkaGETFTVDIYGSGLk-NVYAFDFELSFDkGALSYSDddfvvkTTAKTRNQKVYEYlHHEETDe 1350 Eubacterium do...
ZP_02868467 1205 GKIEIVPSktd----ikaGDEVTLDFYGIGLk-NVNAFSVEMPVDtDLFEVTNfg---sASLSTVFMRNFSK-TRFHNDg 1275 Clostridium sp...
Feature 1                # # ###                                              ###                
2ZF9_A       107 ----DNSFFTATGSSTnngKDGVLWSFVLQVpada----qpgdKYDVQVAyqsr----ttnEDLFTNv------------ 162  Ruminococcus f...
4IU2_A       108 ----GNGVFVASGADDdfgADGVXWTVELKVpada----kagdVYPIDVAyqwd----pskGDLFTDn------------ 163  Ruminococcus f...
CAO00732     128 ----NGFFVATAASSDa-gRDGVLWTFQLTLpsdl----kggeKFPIEIAyksk----ptaEDLFTNg------------ 182  Ruminococcus f...
ZP_06644464 1327 tgalLNLAFMNRGDKPltsGNHILATITMTA------------KQDINLKtkaadsfltieNGILIGpnyst-------- 1386 Erysipelotrich...
ZP_01969204 1322 a--yVNLAFANRGDKElyaGSDVLATITMKAkeni----sttdAKVIDLS-----------KVTLIGpnyst-------- 1376 Ruminococcus t...
ZP_02077903 1325 ntayVNLAYVNRGNKPvyeGSGILATITMKAktnl-----tnvAEAIELNkvtli--gpnhNEVVTN------------- 1384 Eubacterium do...
NP_561962   1244 t-qhVYVNFTNIGDNVkvnGTDTIARITLKAkq--------niTWDMEIS-----------NALLVDsklnsk------s 1297 Clostridium pe...
NP_815521   1279 v-enLYLVLSNQGNKQllnGSMDLVTFKVKVkettrvkrattvEQPLQFDm---------sQGLLVGqgfqqatlsdfsv 1348 Enterococcus f...
ZP_02077900 1351 k-drVYATITNLGNQTslnGDMKLATVTLKA------------NKELDLSnlq------lsHGLVVGsslny-------- 1403 Eubacterium do...
ZP_02868467 1276 s-vdNYVCFANEGTQElinGTGSLAKVTIRAtq--------dfNWDTKAT-----------QAIVVGqdlska------- 1328 Clostridium sp...
Feature 1             #    #                                                    
2ZF9_A       163 ----kKDEEGLLXQAWT----------FTQGI-------------------EQGYIQVESTTS 192  Ruminococcus flavefaciens
4IU2_A       164 ----kDSAQGKLXQAYF----------FTQGIksssnpstdeylvkanatyADGYIAIKAGEP 212  Ruminococcus flavefaciens
CAO00732     183 ----dKDEEGQLMQAWV----------FTQGI-------------------EQGYIEIVAPTS 212  Ruminococcus flavefaciens
ZP_06644464 1387 -vkakINEEPQIPDAPAvkdv--tlkqEDVTMti----------------tNDFLPTDDGTNV 1430 Erysipelotrichaceae bacterium 5...
ZP_01969204 1377 -ieskVDTNIEIPDVPAtekkf-gqsdFDITMt------------------NEKLPTDDPENP 1419 Ruminococcus torques ATCC 27756
ZP_02077903 1385 -----TDETPEIPDVPVettkeytlndFNITMt------------------NDVLTTDDGTNV 1424 Eubacterium dolichum DSM 3991
NP_561962   1298 aiakiVDLESELPSGRPtssk---vskENITVsgdss---------qlqagMGLDKLIDGTTS 1348 Clostridium perfringens str. 13
NP_815521   1349 tvkptELVDKELLQALIt---------LNQARvekey---------tpetwAIFKPILDEAVA 1393 Enterococcus faecalis V583
ZP_02077900 1404 -vnglDPVKPNEPSDMVekrl---vahEDIVKakaksn-------gpvgdgNDIWASLDQNNS 1455 Eubacterium dolichum DSM 3991
ZP_02868467 1329 dalidITQEPTAPETKDvl------glNDIKAit---------------fdNDKKQGMDGSEL 1370 Clostridium spiroforme DSM 1552

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