2ACX,1OMW,3C4X,3CIK


Conserved Protein Domain Family
RGS_GRK-like

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cd08724: RGS_GRK-like 
Click on image for an interactive view with Cn3D
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase (GRK)
The RGS domain is found in G protein-coupled receptor kinases (GRKs). These proteins play a key role in phosphorylation-dependent desensitization/resensitization of GPCRs (G protein-coupled receptors), intracellular trafficking, endocytosis, as well as in the modulation of important intracellular signaling cascades by GPCR. GRKs also modulate cellular response in phosphorylation-independent manner using their ability to interact with multiple signaling proteins involved in many essential cellular pathways. The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. Based on sequence homology the GRK family consists of three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.
Statistics
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PSSM-Id: 188679
Aligned: 34 rows
Threshold Bit Score: 124.226
Created: 17-Aug-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative dimer
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:putative dimer interface [polypeptide binding site]
Evidence:
  • Structure:3C4X_A: Human GRK-1RGS forms a homodimer; contacts at 4 A
  • Structure:2ACX_A: Human GRK6 forms a homodimer in crystal; contacts at 4 A
  • Comment:may not be biologically relevant; GRK1 and GRK6 behaves as a monomer in solution and phosphorylation is not depepdent on dimerization
  • Comment:The homodimer of GRK6 RGS uses conserved hydrophobic residues distinct from those in GRK2 that bind Galpha(q)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #  #                                                               
2ACX_A        56 LCERNpiGRLLFREFCATRPElsRCVAFLDGVAEYEvtpddkRKACGRNLTQNFLshtgpdlipEVPRQL-VTNCTQrle 134 human
3C4X_A        61 MCLEQpiGKRLFQQFLRTHEQhgPALQLWKDIEDYDtaddalRPQKAQALRAAYLepqa-qlfcSFLDAEtVARARAga- 138 cattle
XP_426681     59 ICEQQpiGKRFFRDFLETVPEnlVARDFLDEVSNWElaedniKSSTMENIITNFLktgsknylsFMSSDL-VSKCQAate 137 chicken
P43249        56 LCDKQpvGRLLFRQFCETRPGleSYIQFLDSVAEYEvtpdekLGEKGKEIMTKYLtpkspvfitQVGRDL-VSQTEEkll 134 cattle
Q567A3        61 MCVRQpiGKRLFQQYLESEADykNPVDLWKDIEDYIvaqendRAKKAQKIVNKYYesss-knfcDFLGDKaVSRVKEdfk 139 zebrafish
Q5NUF5        61 VCVEQpiGKRLFREFLEANQEyhGACRLWKDIEDYDlaedseRAKKASKIVQRYMdpsa-khfcPFLPEDiIAKVKEnle 139 Japanese medaka
XP_002433643  38 IVEQQpiGRLLFRQYCQTKPHycKCNGFLDAVDVYElqldedRALAAQDVFNKYLseqstefvdVVNEEL-LERCKQgla 116 black-legged tick
Q52KZ3        54 ICVKQpiGKKIFQEFLETTEFa-HIVEIWNDIEDYDvaededRLRKARAIINKYLdsds-kqfcHYLDEKaIIKVVQdcn 131 African clawed ...
XP_421789     56 ICEKQpiGRLLFRQFCETRPEleCCIRFLDSVAEYEiapdekLGEKGKEIMMKYLtpesptyvpEVSQDL-IQQTEEnle 134 chicken
CAI16487      56 LCDKQpiGRLLFRQFCETRPGleCYIQFLDSVAEYEvtpdekLGEKGKEIMTKYLtpkspvfiaQVGQDL-VSQTEEkll 134 human
Feature 1                                    # ## ##
2ACX_A       135 qgpckDLFQELTRLTHEYLSVAPFADYLDsIYFNR 169 human
3C4X_A       139 ---gdGLFQPLLRAVLAHLGQAPFQEFLDsLYFLR 170 cattle
XP_426681    138 k-dyeNVVQLARDEAKVFLQGKPFQDFQTsPFYDK 171 chicken
P43249       135 qkpckELFSACVQSVHDYLRGEPFHEYLDsMYFDR 169 cattle
Q567A3       140 n-irgDLFKESGQQLLVHLEAKALTGFKDsMYFLR 173 zebrafish
Q5NUF5       140 v-vgdDLFAAALAKTLDYLREAPYVFFLEsMYLKR 173 Japanese medaka
XP_002433643 117 e-askDLFAECAKVVKDFLTGGPFHEFEGsLYFDR 150 black-legged tick
Q52KZ3       132 k-vsdMLFKQLLKSTTDYLKENTFSLYKEsKYFSK 165 African clawed frog
XP_421789    135 nspckELFSHCTKSVLDHLSGEPFQEYLNsMYFDR 169 chicken
CAI16487     135 qkpckELFSACAQSVHEYLRGEPFHEYLDsMFFDR 169 human

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