Conserved Protein Domain Family
FMT_C_HypX

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cd08701: FMT_C_HypX 
C-terminal subdomain of the Formyltransferase-like domain found in HypX-like proteins
Domain found in HypX-like proteins with similarity to the C-terminal domain of Formyltransferase. HypX is involved in the maturation process of active [NiFe] hydrogenase. [NiFe] hydrogenases function in H2 metabolism in a variety of microorganisms, enabling them to use H2 as a source of reducing equivalents under aerobic and anaerobic conditions. [NiFe] hydrogenases consist of a large and a small subunit. The large subunit contains the [NiFe] active site but is synthesized as a precursor without the [NiFe] active site. This precursor undergoes a complex post-translational maturation process that requires the presence of a number of accessory proteins. HypX has been shown to be involved in this maturation process and have been proposed to participate in the generation and transport of the CO and CN ligands. However, HypX is not present in all hydrogen-metabolizing bacteria. Furthermore, hypX deletion mutants have a reduced but detectable level of hydrogenase activity. Thus, HypX might not be the determining factor in the maturation process. Members of this group have an N-terminal formyl transferase domain and a C-terminal enoyl-CoA hydratase/isomerase domain.
Statistics
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PSSM-Id: 187729
Aligned: 23 rows
Threshold Bit Score: 113.914
Created: 16-Apr-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_001520946 177 SHRAISWEsDTTAEIVRKIRSADSQPGLLDVLFGe--------QFYLYGAHPEntl----------tgkPGELIAQRYGA 238 Acaryochloris m...
YP_260772    182 SDRTFSWH-DSAQFIKRSIDAADGQPGVLASLAGg--------QYYVYDAHLDsrt-----------gmPGQLLAVHDDA 241 Pseudomonas flu...
Q7NQJ5       182 ADRAFDWR-APAAEIKRRIDAADGQPGVLADLAGg--------RYYVYDAHLDhrs-----------gePGRILAVHDDA 241 Chromobacterium...
Q57217       173 SDRMLDPAlHSAEEALRIIRASDGDPGALLTIVGq--------TFLVFDAEPAegl----------agpPGTLVGRSRQA 234 Rhizobium legum...
EEY22464     259 SQRDFDMTkHTARDISRRIRSADSQPGCLTGLFGs--------NLFVYGGTVEeagdll-----egqpqAGTIIACRDEA 325 Verticillium al...
XP_001780677 268 ADRRLDWN-LPADELAEIIRASDSQPGTQSVIAGe--------KYLLFGAHVErnppkl-----hpgsaPMDLLGQRDGA 333 Physcomitrella ...
XP_002169603 189 QDREIDWK-CSAEEISSIIRMSDSQPGAIAVLSVpscn--yssKFRVFGSVIEkeqlfs-----fdknaPGDIVGQRNGA 260 green hydra
XP_002592743 260 EDRRVEWT-QPAEDVARGVRACDSQPGALGTLRVavqgqqlkhEFALFGACVEgdpdmvwdlkkerdvtPGDVIGRRNGA 338 Florida lancelet
YP_003513239 183 ADRVFEWT-RSAAEIVRRVHAADSAPGVRSEIEGt--------TVQVYDAAVGeprt--------hsatPGTIVGRSGDA 245 Stackebrandtia ...
XP_002112030 238 NDRLVDWKtMSAHKIANTVRMSDSQPGAIMYTENtahg--aniRRLIFGAHVEkspelin---krtdakPGDIIAKRSGA 312 Trichoplax adha...
YP_001520946 239 ICRATI-DGAVWITHLKRKkke--eqvFFKLPAAQVL 272 Acaryochloris marina MBIC11017
YP_260772    242 VLVACG-DHSLWIGSLRQKpqp--geeTFKRPARHVL 275 Pseudomonas fluorescens Pf-5
Q7NQJ5       242 ALVACG-DASLWIGSLRRQpap--geeTFKRPARHEL 275 Chromobacterium violaceum
Q57217       235 VAMAFR-EGALWVAHLRRPea-----rSLKLPALRLL 265 Rhizobium leguminosarum
EEY22464     326 ICVATCdGKGIWISHIRRTkrkvdamlWPKVPAVSGL 362 Verticillium albo-atrum VaMs.102
XP_001780677 334 VLIRCGeGTTLWITHLKKTv------kSIKLPAVMVL 364 Physcomitrella patens subsp. patens
XP_002169603 261 ILVKCK-NGYIWLSHLKNN--------KLKLPAIYWL 288 green hydra
XP_002592743 339 VLVACGqDTALWISHLKASpk----ktSLKLPATSVL 371 Florida lancelet
YP_003513239 246 IAVAAG-DADVWIGQVKRPlda--hgnGIKLPAGYVF 279 Stackebrandtia nassauensis DSM 44728
XP_002112030 313 VLFKTVdNQGVWISHMKAShg----rqFIKLPSTSVL 345 Trichoplax adhaerens
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