Conserved Protein Domain Family
FMT_core_like_4

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cd08651: FMT_core_like_4 
Formyl transferase catalytic core domain found in a group of proteins with unknown functions.
Formyl transferase catalytic core domain found in a group of proteins with unknown functions. Formyl transferase catalyzes the transfer of one-carbon groups, specifically the formyl- or hydroxymethyl- group. This domain contains a Rossmann fold and it is the catalytic domain of the enzyme.
Statistics
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PSSM-Id: 187720
Aligned: 18 rows
Threshold Bit Score: 223.297
Created: 23-Mar-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #      ###                                                                 
NP_437279      2 RIVFVGAVESSKIALDALIRAKR-TPVLVITLPPEaagrhsdfvglgeigraagsaihhttDINSQAtlEAVAAATPDLs 80  Sinorhizobium m...
ZP_05812348    2 RIAFVGAVEGSRVAFDALVEAGM-TPSLLVTLADDasarhsdfvdlsgparaagasahltkNINAPDtiAWLTEGRPDLt 80  Mesorhizobium s...
ZP_01545910    2 KIVFVGAVEGSLEALAAICAAGH-IPSLVVTLPPElsgrhsdfadlaptaekhgvpvhhtaRSGSEEtlNVLREVAPDLi 80  Labrenzia aggre...
YP_356536      9 RIVYIGARIVGHHCLKALLEAGA-HIAGVLYLDESksgvtvahcsfddlirdyrlnarpftSLHDPDilVWMRACRPDVg 87  Pelobacter carb...
YP_928121      3 KVGFVTCVQLGYSCMEAIYEVGG-KLDLAISLLDNqaksksgriyldsfcnskgipllkasHVNNPEviQSIKDAQLDWl 81  Shewanella amaz...
CAO90774       2 KFAFVTCVQLGLACMETIYEQGG-KLDLVITLKDNlaqdksgriyvdsfcqqrgievvkirSVNAPEviQSLQEREIDWl 80  Microcystis aer...
ZP_06009410    3 RCIVLGTSKFTASLIYGIIDSLN-EVSCVISMPDTskpnnpydlkki--cnkfgikyyefeDINSAEaiNLIKKINPNF- 78  Campylobacter f...
ZP_06076427    2 RVGLIGSVGSSLLTLQKLVEYSF-NVVGVWGYEPHstlnvsgycsmrrfaednhlsyypfiKINSNDikEQIRNASVDIl 80  Bacteroides sp....
ZP_06439456    3 KTVFIGSVMSSKIALETIIDSGV-CVNLVCGLDENysknvsdyypiheiavennipfvkfrKVDDMEiwKAIQLVNPDFi 81  Anaerobaculum s...
YP_003546928   5 RALLIGAVETTRIAFEAIARHPAwDMAAIVTLDPAlagrhsdyvdlepaarergcpvihvdNINREEalAAIRDAGADIa 84  Sphingobium jap...
Feature 1         ########    #        ####       #                   # ##  ##                   
NP_437279     81 LVIGWSQVCRQAFREIAraGTVGFHPAALPRLRGRGVIPWTILRGeERTGSTLFWLDDGIDSGPILLQRQFPVAPDEt-A 159 Sinorhizobium m...
ZP_05812348   81 LVVGWSQICRAEFRAIArlGSIGFHPAPLPRFRGRAVIPWTIIANeKETGSTFFRLDEGVDSGPIVMQKLFPVAEDEt-A 159 Mesorhizobium s...
ZP_01545910   81 LVIGWSQICGPDFRAIPrlGCIGFHPSALPRLRGRGVIPWTILQGeSEAGATLFWLGEGVDDGAIAAQMRYEIDPETitA 160 Labrenzia aggre...
YP_356536     88 MVVGVSQLVGEALLATPrqGFIGMHPTLLPGGRGRAPIPWTLIKGlQQTGVSLFWCDPGADTGDILLQESLPVYYEDt-A 166 Pelobacter carb...
YP_928121     82 FIIGWSQIASQEVLEAPkrGVLGMHPTLLPTGRGRAAIPWAILKGlSKTGVTLFKLDSGVDTGPVVDQIEIALDNQVd-A 160 Shewanella amaz...
CAO90774      81 FIIGWSQIAKPPVLQAVkrGVLGMHPTLLPVGRGRASIPWAIIKGlPETGVSLFQLDEGVDTGPILAQEKLAIAADEt-A 159 Microcystis aer...
ZP_06009410   79 IVSSWPKIIKNEILNLA--YVIGTHPTNLPKDRGRHPLHWNIIRGiKKSKLSFFKMDKNIDSGNLLLQLKYAISKYDd-I 155 Campylobacter f...
ZP_06076427   81 FVVGVSQLVDEDIIRLPrlACVGFHPTKLPKGRGRAPMAWLILDK-GEGAATFFKIDTNADEGDIFVQEPFSIREDDd-V 158 Bacteroides sp....
ZP_06439456   82 FVIGLSQIIPKSILNLAneYAIGFHPTPLPKFRGRAAIPWQILLGvSESKVSLFKLDEGVDSGDIIFQYPYKIDKDDy-A 160 Anaerobaculum s...
YP_003546928  85 FVMGWSQICGPAFRALFpdRAIGYHPAALPRLRGRAAIPWTILQQePITAGTLFWIDAGTDTGDIADQQFFHVAPDEt-A 163 Sphingobium jap...
Feature 1                              
NP_437279    160 RSLYTKHTENLAEMVVEAAAQV 181 Sinorhizobium meliloti 1021
ZP_05812348  160 RSLYEKHKQALREMTPLVVSAI 181 Mesorhizobium sp. LMG 24607
ZP_01545910  161 RELYDRVRSAVSQMLPPLLTRI 182 Labrenzia aggregata IAM 12614
YP_356536    167 GVLGARTDDVAAQLLVKSLPLL 188 Pelobacter carbinolicus DSM 2380
YP_928121    161 NILYQEVDAAHISLIKKVIPSL 182 Shewanella amazonensis SB2B
CAO90774     160 TTLYQRVAIAHQQLIGRIWPEL 181 Microcystis aeruginosa PCC 7806
ZP_06009410  156 NSLNHKIEKLAKTGINKLLSRN 177 Campylobacter fetus subsp. venerealis str. Azul-94
ZP_06076427  159 TSIGVKLKEAMVRALDRWLPSL 180 Bacteroides sp. 2_1_33B
ZP_06439456  161 LDVYEKVCYAMRIALHHCLTNI 182 Anaerobaculum sp. OS1
YP_003546928 164 ATLYAKHMRALAVMLDRMLERI 185 Sphingobium japonicum UT26S

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