Conserved Protein Domain Family
FMT_core_HypX_N

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cd08650: FMT_core_HypX_N 
HypX protein, N-terminal hydrolase domain
The family represents the N-terminal hydrolase domain of HypX protein. HypX is involved in the maturation process of active [NiFe] hydrogenase. [NiFe] hydrogenases function in H2 metabolism in a variety of microorganisms, enabling them to use H2 as a source of reducing equivalent under aerobic and anaerobic conditions. [NiFe] hydrogenases consist of a large and a small subunit. The large subunit contains [NiFe] active site, which is synthesized as a precursor without the [NiFe] active site. This precursor then undergoes a complex post-translational maturation process that requires the presence of a number of accessory proteins. HypX has been shown to be involved in this maturation process and have been proposed to participate in the generation and transport of the CO and CN ligands. However, HypX is not present in all hydrogen-metabolizing bacteria. Furthermore, hypX deletion mutants have a reduced but detectable level of hydrogenase activity. Thus, HypX might not be a determining factor in the matur ation process. Members of this group have an N-terminal formyl transferase domain and a C-terminal enoyl-CoA hydratase/isomerase domain.
Statistics
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PSSM-Id: 187719
Aligned: 23 rows
Threshold Bit Score: 218.256
Created: 23-Mar-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #        ###                                  ########    #           ####
NP_942660      1 MRILLLTHSFNSLTQRLFVELrQRGHLVSVEFdiaDSVTEEAVALFAPDLVIAPFLKRAIPERIWSRl-----VCLVVHP 75  Ralstonia eutro...
YP_001358952   1 MKILLLVSAFNSLTQAVYTALlDRGDEIAVAYaisEEQMLEEIGAFAPELILCPFLKQYIPPSIYENy-----ATFIFHP 75  Sulfurovum sp. ...
XP_002169603   8 LDVLLFLNKFNGLSQRIFLELeKHGHRLKVFEinkEDDMLKYSKDYNHDLIICPFLTKCVPREVWSKt----kPCLIVHP 83  green hydra
ZP_05072344    1 MKILLIISSFNSLSQRVFCELqDMGHTVSVQFpisDKEMLDAVDSFKPDIIFSPFLKKFIPKEIFQNt-----PTFILHP 75  Campylobacteral...
XP_002592734  87 RKITFLCNSFNGLSQRLYLELvSRGHHVTVHEdprGEEMTRAVEADQPDLVLCPFQTRRVPAELYNNpa---rPVLIVHP 163 Florida lancelet
XP_001780677  87 LSFLLVCDAFNSMTQRTFLKLqENGHQVIVHEwkdGDTMIATVDCFEPDVILCPFLTKRIPEAIYNGt----vPCLVIHP 162 Physcomitrella ...
XP_002112030  57 YNILFFCNSNNSLTQRAYLELtTRGHRVEIVEnpsPDTMIECAERENPDIIICPFLTKRIPPQLYDEpsarstPCWIVHP 136 Trichoplax adha...
ZP_04387290   53 LSVLLLVTSDNGLSQRAGLVLrEAGHQVRTAVvadADAVLAATSAGDFDLIICPFLKAYVPESVWQRw-----TTIIIHP 127 Rhodococcus ery...
XP_383809     25 MNILFLCTAHNSLSQQLYLRL-CKTHTVTIEYalsDKVMIEAANLVRPDLIICPFLTSPVPSEVFDNy-----LTLIVHP 98  Gibberella zeae...
EEY22464      22 MNILFLCTAHNSLSQRLYLAL-AKTHSVTIEYalsDQAMVEAVALAQPDLIICPFLTSRVPNEIYLNy-----LTLIVHP 95  Verticillium al...
Feature 1              #                                       # ##  ##                          
NP_942660     76 GIVGDRGPSALDWAIVRDER--------------------SWGVTVLQANGEMDAGPVWASATFPMRAAR-----KSSLY 130 Ralstonia eutro...
YP_001358952  76 GPRGDRGPNALEYALQSHTK--------------------EWGVVILRANELYDGGDIYAEVPFNVRDTY-----KASLY 130 Sulfurovum sp. ...
XP_002169603  84 GIQGDRGMNSLDWAIKENKL--------------------QWGVTVLQAAENMDAGNIWSTTNFSINRNNmnsltKSSLY 143 green hydra
ZP_05072344   76 GIRGDRGHNALDHAIRDKKE--------------------EWGVVILKANEEFDGGEIYSEVRFKMRDAS-----KASIY 130 Campylobacteral...
XP_002592734 164 GIPGDRGPSSIDWALKEGAS--------------------EWGVTVLQADDEMDAGDIWATCKFPVNRQAt----KSSLY 219 Florida lancelet
XP_001780677 163 GIEGDRGMSSIDWALQESQE--------------------EWGVTILQAEEEMDAGPIWATKNFRISRDFgesptKSSLY 222 Physcomitrella ...
XP_002112030 137 GIVGDRGIHSIDWALHDQLP--------------------EWGVTVLQAADEIDAGDVSSTATFPIKRQAt----KSSLY 192 Trichoplax adha...
ZP_04387290  128 GPPGDRGPSSLDWAITDGEP--------------------IWGVTALQAAEELDAGAVWAWRTFELRNGAt----KSSVY 183 Rhodococcus ery...
XP_383809     99 GPPGDAGPSAIDWVLMGDDGtvpdsaellksqswnetgrsHWGVTVLQAVAEMDAGPVWAFEQFEIDINDpe-ttKATLY 177 Gibberella zeae...
EEY22464      96 GPPGDAGPSALDWVLMGDDGsetsvdyllqssaparpgrsHWGVTVLQAVEEFDAGPVWAFEQFPIDIDApd-atKSNLY 174 Verticillium al...
Feature 1                            
NP_942660    131 RNEVTVAAVQAVLEALAAFE 150 Ralstonia eutropha H16
YP_001358952 131 RQEVTQASLRALELFFENLA 150 Sulfurovum sp. NBC37-1
XP_002169603 144 SNEITNASVVSVLQAVSNFI 163 green hydra
ZP_05072344  131 RTEVADATLKAMKELFVNLE 150 Campylobacterales bacterium GD 1
XP_002592734 220 SKEVTQAAVVSVLKAIEAWE 239 Florida lancelet
XP_001780677 223 RIDCVDAAMKCLDEVLHNLK 242 Physcomitrella patens subsp. patens
XP_002112030 193 QNEIVQAAVRALLQAVDQFR 212 Trichoplax adhaerens
ZP_04387290  184 NEEVTDAAMEGITEVVEHFR 203 Rhodococcus erythropolis SK121
XP_383809    178 RGPVTQAAITATFSAIDRII 197 Gibberella zeae PH-1
EEY22464     175 RGPVTRAALTATLAALERIS 194 Verticillium albo-atrum VaMs.102

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