2FMT,3Q0I


Conserved Protein Domain Family
FMT_core_Met-tRNA-FMT_N

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cd08646: FMT_core_Met-tRNA-FMT_N 
Click on image for an interactive view with Cn3D
Methionyl-tRNA formyltransferase, N-terminal hydrolase domain
Methionyl-tRNA formyltransferase (Met-tRNA-FMT), N-terminal formyltransferase domain. Met-tRNA-FMT transfers a formyl group from N-10 formyltetrahydrofolate to the amino terminal end of a methionyl-aminoacyl-tRNA acyl moiety, yielding formyl-Met-tRNA. Formyl-Met-tRNA plays essential role in protein translation initiation by forming complex with IF2. The formyl group plays a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. The N-terminal domain contains a Rossmann fold and it is the catalytic domain of the enzyme.
Statistics
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PSSM-Id: 187715
Aligned: 199 rows
Threshold Bit Score: 165.694
Created: 12-Feb-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #   ##                                                                    
2FMT_B         4 LRIIFAGTPDFAARHLDALLSSg------HNVVGVFTQPDRPaGRGKklm-----psPVKVLAEE-KGLPVFQPvslrp- 70  Escherichia coli
XP_571069     77 FRILFCGSDDFSVASLKAVYEAkd----vWSSIDVVVPAEREiGRGGkhahhekytpALRLYAEQ-NNLPVSTIpstglk 151 Cryptococcus ne...
ZP_02544390    6 KTIIFFGTEDFSLITLKALVEAg------FNIGAVVTKPDARrGRGTkks-----qpAVKIYANE-HNIQVWQPqnlk-- 71  candidate divis...
XP_002172618   9 SRVVFFGTDDFAVPILRSVVELlrp--qvEQRLVVVSGSGRNtGRRRndiskqtlasSVSREAQE-HGIPVYQFpgketl 85  Schizosaccharom...
AAP56479       4 KKVIFFGTTELSLACLKELLVDn-----fFNVVAIICPPDRVnLNNKknk-----lnAVKQYCLD-NKLTIYQPekls-- 70  Mycoplasma gall...
XP_760991     45 YDILFCGTDSFASCVLSSLVANrs----lCSSLHVLTPPDVEqSWGAsrm----kvsPVKQLALQ-HALPHQAVpaagld 115 Ustilago maydis...
XP_001881071   1 FKILFMGRDDFSCLVLKELYAAsd----lWQNILVATNPDKKvGRRGsll----svsPLKILSQT-LNLPVHSIphtkpe 71  Laccaria bicolo...
XP_001934436  33 LRILFCGADEFSIASLRAVVAAqrhvpglIHDIHVLHRPAKPtGRGLktl----revPIKRVATEeLNLSTHAVdt---- 104 Pyrenophora tri...
NP_593920      7 LNVIFLGTDEFSIPILRKLIGC-------VQRVRVVSAGGKRqSRRGeip-----lpPAAMEANA-NGLEYIKLqdg--- 70  Schizosaccharom...
XP_368466     40 LRILFCGSDAFSCESLRALDKVrrsepqlVKSIDVVTRPPKRtGRGLkvi----rhaPIETLATD-LQLPVHPLdsfr-- 112 Magnaporthe gri...
Feature 1                                 ########    #          ####       #                   #
2FMT_B        71 ---------qenqQLVAELQADVMVVVAYGLILPKAVLEMPrl--gCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIM 139 Escherichia coli
XP_571069    152 a-----wsppepfTSSDLNSSHMLLTASFGHIIPLRLLKLFpp-iqRLNVHPSLLPRWRGAAPLQWTIASGDEETGVSVQ 225 Cryptococcus ne...
ZP_02544390   72 ----------divDDIKKIGKPVGILVSYGKIIPQSIIDLFtp--gIINIHPSLLPKYRGPTPIESAIKNGDKETGISII 139 candidate divis...
XP_002172618  86 ntt-asnvapdwqALKKFTHGDLAIAASFGRFIPASILNQFty--gGINVHPSLLPQFRGPGPIYAAILRQVSKTGVSIQ 162 Schizosaccharom...
AAP56479      71 ----------efyDQLAQMEFDLGVCIAYGQFIPKKVIDLFsd--gILNVHPSKLPLLRGGAPIHHAIINGFESTAISIM 138 Mycoplasma gall...
XP_760991    116 --------nyeppQHLCTNPKAILLTCSFGHLIPDRLLDSFpdpwqRINIHPSLLPNLRGAAPIQWALARRLHTSGVSIQ 187 Ustilago maydis...
XP_001881071  72 frqwklpppfselQMDSPNPDHLLVTASFGRILTTTQLDAFlp-trRLNVHPSLLPAYRGPAPIQHTLLNGEQETGVCVI 150 Laccaria bicolo...
XP_001934436 105 -----------ftGWTPPIPISLIIAVSFGLLVPPRILRHAqy--gGLNVHPSLLPDLHGPAPIEHAITKGREYTGVTVQ 171 Pyrenophora tri...
NP_593920     71 -----------wkNFHMRPDDQLAITASFGRFVPFKILNQLpy--gGINIHPSLLPKYRGAGPVYSTILNGDRLAGVTIQ 137 Schizosaccharom...
XP_368466    113 ---------gwelPLVDGEAINLIIAVSFGLFIPSRILKAVky--gGLNLHPSFLPDLRGSAPIQWAIMLDRQHTGVTLQ 181 Magnaporthe gri...
Feature 1         ##     ##                                                                      
2FMT_B       140 QMD---VGLDTGDMLYKLSCPITAEDTs--------GTLYDKLAELGPQGLITTLKQLad----------gtAKPEVQDe 198 Escherichia coli
XP_571069    226 TLVryaLGVDAGDILGRAEGIKVPHDTr-------yETLLPSLAGAGGKLLVDVLRKIqn----------gtVTTAAQDe 288 Cryptococcus ne...
ZP_02544390  140 QLN---ARMDAGPIYRQVKHALNSKETk--------LDLYNTLGKIGANEIIKTLPGIln----------esILPKDQDe 198 candidate divis...
XP_002172618 163 RIHp--AEFDKGELLAQKAYVMNGTETy--------EQLCQTLAQIGAGLLSRVLRLGtydkdnapegitsfLGKRVQVa 232 Schizosaccharom...
AAP56479     139 KLD---EKMDHGPVYDQLEIKINPEWNh--------DDLNQEIIAKSPAFLIKTIKNIye----------tnLQPKEQNh 197 Mycoplasma gall...
XP_760991    188 TLEk--GRFDTGTIVNQQAFRFPPDPLhgqveshtfLHVQRVMAHRAADLLVLTLSNLph----------cwQNRWIQDe 255 Ustilago maydis...
XP_001881071 151 NMLkkkEGIDAGGIWGFTRVVCPVPKEat------fTSLQETLACEGGKLLVSVMRDMra----------gkASLQPQPt 214 Laccaria bicolo...
XP_001934436 172 TLHp--LHFDQGTILAQTPHPGVAIPHgt-----taPELERQLAKAGAELLVHVLKSRrfvp------phepAGWYATSn 238 Pyrenophora tri...
NP_593920    138 TMDs--KQFDKGKSLAQAYLKLNGKETy--------TLLTKILSLGAAGMLEHVLLQSl-------------YLPNCQT- 193 Schizosaccharom...
XP_368466    182 TLDd--KAFDRGLILSQTPRPGIPITPda-----ttADLTAQLAAPSAAMLIAGLRAGlhlppl---splsdNAHAPQP- 250 Magnaporthe gri...
Feature 1                  
2FMT_B       199 t-lVTYAEKL 207 Escherichia coli
XP_571069    289 r-yITLAPKI 297 Cryptococcus neoformans var. neoformans JEC21
ZP_02544390  199 s-kASYCSLL 207 candidate division TM7 single-cell isolate TM7c
XP_002172618 233 ---ESWAPKV 239 Schizosaccharomyces japonicus yFS275
AAP56479     198 e-rFTLGLNI 206 Mycoplasma gallisepticum str. R(low)
XP_760991    256 a-qRTYAPKL 264 Ustilago maydis 521
XP_001881071 215 sstLSHAPKI 224 Laccaria bicolor S238N-H82
XP_001934436 239 g-pVSHAPKT 247 Pyrenophora tritici-repentis Pt-1C-BFP
NP_593920    194 ---NTVAPQI 200 Schizosaccharomyces pombe 972h-
XP_368466    251 ---SFHARKL 257 Magnaporthe grisea 70-15

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