3CE9,5FB3,4RFL,4RGQ


Conserved Protein Domain Family
G1PDH_related

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cd08549: G1PDH_related 
Click on image for an interactive view with Cn3D
Glycerol-1-phosphate dehydrogenase and related proteins
This family contains bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. These proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH) which plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Statistics
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PSSM-Id: 341479
Aligned: 5 rows
Threshold Bit Score: 455.871
Created: 16-Feb-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitemetal binding
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                   #                                                 
3CE9_A     12 PLILEVGNNKIYNIgqiikkgnfkRVSLYFGegiyelfgETIEksikss--nieieAVETVKnid---fdEIGTNAFkip 86  Clostridium acetob...
B3EYN8     26 IEQMVVGREAFARLvaylrhkryeRVAIVADdhtfaaveRSLCdqlengsirytvcLVQPDEngdv-iadERSIVQVlle 104 Geobacillus stearo...
5FB3_A     10 PRTIIFGPGALEKTpevi--ppsgRVLIITGksstrkyaERVAellk------qncEIISYDq------vELEKPGF--- 72  Pyrobaculum calidi...
4RFL_A     42 PRYTIIEDGAINKIeeilkklnlkNPLVITGkntk-kycRFFY-------------DIVYYDeilnnleiELKKYTAy-- 105 Methanocaldococcus...
4RGQ_A     39 PRYTIIEDGAINKIeeilkklnlkNPLVITGkntk-kycRFFY-------------DIVYYDeilnnleiELKKYTAy-- 102 Methanocaldococcus...
Feature 1                 ###  #  #              ## #                                   #     
3CE9_A     87 --aevDALIGIGGGKAIDAVKYXAFLrKLPFISVPTSTSNDGFSSPVASLLIngkr--tsvpAKTPDGIVVDIDVIKGSP 162 Clostridium acetob...
B3EYN8    105 tpddvDVLIAVGAGTIHDITRFSSYKmRIPFISVPTAPSVDGFTSMGAPLIIrgvk--ktiqAQAPIAVFAHTGVLCQSP 182 Geobacillus stearo...
5FB3_A     73 -----DLVIGIGGGRPLDMAKVYSYIhKKPFVAIPTSASHDGIASPYVSFSLtqrfskygkiSSSPVAIIADTSIILSAP 147 Pyrobaculum calidi...
4RFL_A    106 -----DCVIGIGGGRSIDTGKYLAYKlGIPFISVPTTASNDGIASPIVSIRQps------fmVDAPIAIIADTEIIKKSP 174 Methanocaldococcus...
4RGQ_A    103 -----DCVIGIGGGRSIDTGKYLAYKlGIPFISVPTTASNDGIASPIVSIRQps------fmVDAPIAIIADTEIIKKSP 171 Methanocaldococcus...
Feature 1       #      #   #                                                                  
3CE9_A    163 EKFIYSGIGDLVSNITALYDWKFEEENHKSiiddfAVXISKKSVNSFVRTdfk--sikDEVFLKELVDSLTXNGIAXEIA 240 Clostridium acetob...
B3EYN8    183 KEMIAAGFGDMVAKYTSLADWQFAHWMADEpycpfVHQLTEQSLQTCVDHiddi-aagGEQGIRVLMDALLQSGIAMLLM 261 Geobacillus stearo...
5FB3_A    148 SRLLKAGIGDLLGKIIAVRDWQLAHRLKGEeyseyAAHLSLTSYKIAVGNaqkiknfiREEDVRVLVKALIGCGVAMGIA 227 Pyrobaculum calidi...
4RFL_A    175 RRLLSAGMGDIVSNITAVLDWKLAYKEKGEkysesSAIFSKTIAKELISYvln---sdLSEYHNKLVKALVGSGIAIAIA 251 Methanocaldococcus...
4RGQ_A    172 RRLLSAGMGDIVSNITAVLDWKLAYKEKGEkysesSAIFSKTIAKELISYvln---sdLSEYHNKLVKALVGSGIAIAIA 248 Methanocaldococcus...
Feature 1               #   #                #                                                
3CE9_A    241 GNSSPASGAEHLISHALDKflp-----npqLHGIQVGVATYIXSKVhkh------------------------------- 284 Clostridium acetob...
B3EYN8    262 GQSYSASGAEHHLSHYWEMeflrq-kkrqvLHGAKVGVSTPIIIEHyqrvfwpllnelekrpksmdeatwerlkantasi 340 Geobacillus stearo...
5FB3_A    228 GSSRPCSGSEHLFAHAIEVrvek---edevVHGELVALGTIIMAYLhgi------------------------------- 273 Pyrobaculum calidi...
4RFL_A    252 NSSRPASGSEHLFSHALDKlkeeynlninsLHGEQCGIGTIMMSYLhekenk---------------------------- 303 Methanocaldococcus...
4RGQ_A    249 NSSRPASGSEHLFSHALDKlkeeynlninsLHGEQCGIGTIMMSYLhekenk---------------------------- 300 Methanocaldococcus...
Feature 1                                                                    
3CE9_A    285 --------reERIKKILSDTGffnyvkglnxKKSDFKRAISEAHlIKPARYTYLhv-ekNCET 338 Clostridium acetobutylicum ATCC 824
B3EYN8    341 relleslpspERIRTMLAKVGgaiapeqlgiDPQLVERSLREAHrLRLNRFTMLyf-lnELIF 402 Geobacillus stearothermophilus
5FB3_A    274 --------nwRRIKRIADIIGlptslrqaniDVDLALEALTTAHtLRPDRYTILgdglsREAA 328 Pyrobaculum calidifontis JCM 11548
4RFL_A    304 ----klsglhEKIKMSLKKVDapttakelgfDEDIIIEALTMAHkIRNRWTILRdg-lsREEA 361 Methanocaldococcus jannaschii DSM 2661
4RGQ_A    301 ----klsglhEKIKMSLKKVDapttakelgfDEDIIIEALTMAHkIRNRWTILRdg-lsREEA 358 Methanocaldococcus jannaschii DSM 2661

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