3ESM


Conserved Protein Domain Family
YcnI_like
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cd08545: YcnI_like 
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Reeler-like domain of YcnI and similar proteins.
YcnI is a copper-responsive gene of Bacillus subtilis. It is homologous to an uncharacterized protein from Nocardia farcinica, which shares a conserved three-dimensional structure with cohesins and the reeler domain. Some members in this YcnI_like family have C-terminal domains (DUF461) that may bind copper.
Links
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Statistics
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PSSM-Id: 260082
Aligned: 71 rows
Threshold Bit Score: 106.231
Created: 18-Feb-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3ESM_A           1 MSLHVTADAPGAAQ---GGYSVVTFRVPTESEtAATTAMTVTLP-NVRSARTEPMPGWTARVDRndk------------s 64  Nocardia farc...
Q9RPV8          23 ASAHVVVYPLEATQ---GSYEKFTVRVPTEKD-IPTTKVKIEIPkDVEISRFEPKEGWKYELQKdss------------g 86  Bacillus mega...
ZP_04851828     34 AGAHVTVKPSQSAP---GAWETYSLKVPVEKD-VNTVKVALKIPdGVAFKQYRPLPDWSVELTIaed------------g 97  Paenibacillus...
YP_003321513    23 ASAHVTVWPREANA---GSFEKYTVRVPTEKD-IPTVQVELIFPeGLRVSSFQPKPGWTYEVQRdaa------------g 86  Sphaerobacter...
YP_002773901    21 AQAHVNVYPKETTT---GSYEKYTVRVPVEKD-VNTTKVKVEFPaGVKVNSVQPIPGWSYEFEKdkd------------g 84  Brevibacillus...
YP_003186018    24 ASAHVVVIADNPTPpaaGGFEQYTMRVPCEKN-DPTVKIVLKVPkGVSFVSYEPAPGWKVTENQvn-------------- 88  Alicyclobacil...
YP_003397550    31 AQAHVSVVPKTAPA---GSFTVLDVRVPNERDdAATAKVDLKLPpGFTSVSFEPVPGWDVDVIRerlstpietengpise 107 Conexibacter ...
ZP_04817607     23 ADAHVTLNPNQSEP---GSYDKYDVRVPVEQD-DNTVKVELKVPkGVNVANVAPVQGFKHHFEKdkk------------g 86  Staphylococcu...
ZP_04059440     22 ADAHVTINPKAVEP---GSYEKVDVRVPVEQK-DHTEKIELDIPkEVQVSNIQPVEGYKYSLDKdkk------------g 85  Staphylococcu...
jgi:Pjdr2_5843  25 ASAHVTVQPPSVPA---NSYQVFAVRVPSEEKgVNTVKVQVKVAdGAVISRVEPKPGWTSELEKdgn------------g 89  Paenibacillus...

3ESM_A          65 eAVSVTWTAdpgnpgvqpgQFQRFVVSIGPLPs-aETVSFPAEQTYsDGRVVAWNQPpaa-----------xxsEPEHPA 132 Nocardia farc...
Q9RPV8          87 lITSVTWTAtdag--lsptEFGEFNMQGKVGDn-aKKIVWKAYQTYkDGSTVAWEGPa----------------DADTPA 147 Bacillus mega...
ZP_04851828     98 tVTAVTWTAegag--igpgEFQQFEFVVQNPGe-pAELAWDAFQYYsDGSVVEWTGAe----------------GTDRPH 158 Paenibacillus...
YP_003321513    87 nITGVIWSGgsi----gpgEFDEFAFVAANPEe-pGELVFVAHQTYaDGSVVSWEGPp----------------GSEYPA 145 Sphaerobacter...
YP_002773901    85 vNTALVWTAtagg--ikahEFQEFTFVGANPKe-eGQLAWKAYQTYaNGEVVEWTGDk----------------DSNTPA 145 Brevibacillus...
YP_003186018    89 gQTLVTWQAtgdg--iqpgQFEQFPFLATNPRq-pGVIAWDAFQYYrDGSIVAWTGAtgsatphsttqivaagtASETPA 165 Alicyclobacil...
YP_003397550   108 qVSRIVWSGgri----ppgAFTDFPISVQIPErvgTTLTFKALQTYvGGEVVRWIGAp----------------DAELPA 167 Conexibacter ...
ZP_04817607     87 nITKITWTAtgkg--igpnEFIEFPIVAANPEd-eGTFKWKAYQTYdNGDVVKWTGKe----------------DSEHPA 147 Staphylococcu...
ZP_04059440     86 nITKITWKAkdkg--igpnEFIEFPLLVESPKe-eGTYSFKAVQTYdNKDKVKWTGKa----------------NSEHPA 146 Staphylococcu...
jgi:Pjdr2_5843  90 vVTTITWTAadggg-lsetEFTEFRMSGKVNEd-aTQLVWKAYQTYsDNKVVEWVGAd----------------GSDKPA 151 Paenibacillus...

3ESM_A         133 PTLTLATAP 141 Nocardia farcinica
Q9RPV8         148 SITTVVKGN 156 Bacillus megaterium
ZP_04851828    159 SLTVVSAAE 167 Paenibacillus sp. D14
YP_003321513   146 SVTTIVAGA 154 Sphaerobacter thermophilus DSM 20745
YP_002773901   146 SVTTIKAGV 154 Brevibacillus brevis NBRC 100599
YP_003186018   166 NAVQTAPGE 174 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
YP_003397550   168 AQVEVVAPA 176 Conexibacter woesei DSM 14684
ZP_04817607    148 PTTTVKKGA 156 Staphylococcus epidermidis M23864:W1
ZP_04059440    147 PTLEVEKNA 155 Staphylococcus hominis SK119
jgi:Pjdr2_5843 152 SVTTVTAAV 160 Paenibacillus sp. JDR-2
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