2BBZ,2F1S,2BBR,3CL3


Conserved Protein Domain Family
DED_c-FLIP_r2

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cd08340: DED_c-FLIP_r2 
Click on image for an interactive view with Cn3D
Death Effector Domain, repeat 2, of cellular FLICE-Inhibitory Protein
Death Effector Domain (DED), repeat 2, similar to that found in cellular FLICE-inhibitory protein (c-FLIP/CASH, also known as Casper/iFLICE/FLAME-1/CLARP/MRIT/usurpin). c-FLIP is a catalytically inactive homolog of the initator procaspases-8 and -10. It negatively influences apoptotic signaling by interfering with the efficient formation of the Death Inducing Signalling Complex (DISC). At low levels, c-FLIP has been shown to enhance apoptotic signaling by allosterically activating caspase-8. As a modulator of the initiator caspases, c-FLIP regulates life and death in various types of cells and tissues. All members contain two N-terminal DEDs and a C-terminal pseudo-caspase domain. DEDs comprise a subfamily of the Death Domain (DD) superfamily. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and CARD (Caspase activation and recruitment domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Statistics
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PSSM-Id: 260046
Aligned: 9 rows
Threshold Bit Score: 99.7339
Created: 18-Nov-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
DED1/DED2charge triad
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:DED1/DED2 interface [polypeptide binding site]
Evidence:
  • Comment:The tandem DED domains, DED1 and DED2, in FLIP are associated rigidly to form a single compact structure, with each domain playing a unique structural role and is not interchangeable with the other. This explains why both domains are required for FLIP function.
  • Structure:2BBZ_A; Interface between DED1 and DED2 in Molluscum contagiosum virus MC159 (v-FLIP); contacts at 4A.
  • Structure:3CL3_A; Interface between DED1 and DED2 domains in Human herpesvirus 8 v-FLIP; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #  ## ##   #                             # #   #                                
2BBZ_A     94 TRYRKLMVCVGEELDSSELRALRLFACNlnPSLSTALSEssRFVELVLALENVGLVSPSSVSVLADMLRTLRRLDLCQQL 173 McVI
2F1S_A     97 TRYRKLMVCVGEELDSSELRALRLFACNlnPSLSTALSEssRFVELVLALENVGLVSPSSVSVLADMLRTLRRLDLCQQL 176 McVI
2BBR_A     94 TRYRKLMVCVGEELDSSELRALRLFACNlnPSLSTALSEssRFVELVLALENVGLVSPSSVSVLADMLRTLRRLDLCQQL 173 McVI
3CL3_A     97 SPYQLTVLHVDGELCARDIRSLIFLSKD--TIGSRSTPQ--TFLHWVYCMENLDLLGPTDVDALMSMLRSLSRVDLQRQV 172 KSHV
AAL41007  100 SDYRVLMADVSENLDKEDLQSLIFLLSSilPKERSTRAT--SFLDVVVELEKLNEVSCEKLDFLEKCLKNIRRNDLVKKI 177 zebrafish
AAH68888  133 FSYRSLMVGISEQLEESDLESLIFLLKDhmRSGGKLKNK--TFLTLVTELEKMNLIHPGKLDLLEQSFQNIRRIDLKNKI 210 African clawed frog
O15519     91 SDYRVLMAEIGEDLDKSDVSSLIFLMKDymGRGKISKEK--SFLDLVVELEKLNLVAPDQLDLLEKCLKNIHRIDLKTKI 168 human
ADV58938   96 PDYRVLMVEISENLEKDEVSSLVFLLRDfaPRMKMAKDK--SFLRLIIELEKLNLVAPNQLDLIENCFRNIHRIDLIKKI 173 chicken
ADB80145   98 SKFRVLMANISEDLDTEDLEQILFLLST--TLPREKRDAk-SFLDVIVELEKLDLVSPERVDMVEECLRNICRIDLAKKV 174 Japanese medaka
Feature 1        
2BBZ_A    174 VEY 176 McVI
2F1S_A    177 VEY 179 McVI
2BBR_A    174 VEY 176 McVI
3CL3_A    173 QTL 175 KSHV
AAL41007  178 QAY 180 zebrafish
AAH68888  211 IKF 213 African clawed frog
O15519    169 QKY 171 human
ADV58938  174 EKY 176 chicken
ADB80145  175 STY 177 Japanese medaka

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