Conserved Protein Domain Family
RLP_RrRLP

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cd08210: RLP_RrRLP 
Ribulose bisphosphate carboxylase like proteins (RLPs) similar to R.rubrum RLP
RLP from Rhodospirillum rubrum plays a role in an uncharacterized sulfur salvage pathway and has been shown to catalyze a novel isomerization reaction that converts 5-methylthio-d-ribulose 1-phosphate to a 3:1 mixture of 1-methylthioxylulose 5-phosphate and 1-methylthioribulose 5-phosphate.
Statistics
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PSSM-Id: 173975
View PSSM: cd08210
Aligned: 19 rows
Threshold Bit Score: 424.729
Threshold Setting Gi: 217977428
Created: 7-Jan-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:active site [active site]
Evidence:
  • Comment:annotation is based on homology to other subgroups

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
ABH04879       6 RFSVIYRLVgsek-eaiKKALDICLEQTVEFPeelvp-rgmirDHVVGRIESVTpisq------------------ascR 65  Heliobacillus m...
EFB85459       5 RFIVIYRIEastyeeakSIAWAVQVEQTIEFPyefvt-dpyikETITGRLESLEpivedspyinvgvmpnavidtsryyL 83  Veillonella par...
ZP_02001705    5 RFTVIYHIVgeqa-ialEKAKTLCLEQTVEMGdtlvp-dgfirDHIVGQLEQFSaltn------------------piyE 64  Beggiatoa sp. PS
CAL54456     317 RFEVTYLLVapseaaarEKVLEICLEQTVELPatlvpegtwirEHVVGRLESLShpksgph-----------skrtdawN 385 Ostreococcus tauri
ZP_05734354   24 RFTATYRIAaddyaeakKIARGIAVEQTVECPdelfv-ntwieDSVIGQIEDLKkadp------------------gsyY 84  Dialister invis...
ZP_05843805    2 RFSVTYRIAaanlaearLRAEGIALEQTVEVPadvvp-agfiaDQIVGQIVEIGaeae------------------gryR 62  Rhodobacter sp....
ZP_02168343    6 RFRVRYRLKadsaaeaeKRATGIALEQTVEIPgdivp-egyisNEIVGQVEDVAaagp------------------dtyK 66  Hoeflea phototr...
YP_001373335   4 RFTVTYFVRaadeaeakARALDIALEQTVEIPrnvvp-kgyveDEILGRLESLLqdpeg----------------rpgfL 66  Ochrobactrum an...
ZP_04429129   34 VFRVLYQLNcpkn-saeAVARDIALEQTVEVPeslit-deviwQNFAGQVVSVRsvse------------------hvqV 93  Planctomyces li...
ZP_01155131    3 RFVVTYRIVaedeadaaARAASIALEDTVEIPrdvvp-agyveDVVLGRVESVTargg------------------gvwT 63  Oceanicola gran...
Feature 1                               #                                              # #       
ABH04879      66 VTISYAVETAsgelTQLLNVIFGNISIkpGIVVEEIYLPESLLKSFRGPRFGRQGLRKLLGvphRPLLFTALKPMGLSTA 145 Heliobacillus m...
EFB85459      84 ARISYHVDTTaleaTQFLNVVFGNSSLqpHIWVVDIELCPTLYDVFKGPRFGLQGIRRLVEtptRPMIQAVVKPMGTPNG 163 Veillonella par...
ZP_02001705   65 AKISYDIETSafelTQLLNVIFGNSSIkaGIKVHRLNFGDEMLSHFSGPRFGIAGLRKIVGifdKPLLCTALKPMGKSPS 144 Beggiatoa sp. PS
CAL54456     386 AVVSYHADTTggelTQLVNVIFGNTSMkeNVMVVDFELPESMLREYPGPRFGVEGIRRLLRvpeGPLVMTALKPMGLNSQ 465 Ostreococcus tauri
ZP_05734354   85 AIISYSPDTVegemTELMNMLFGNTSLqpGIRLMSFELPDSMYRHYPGPKFGRQGIRELCGiekGPILMSALKPLGRSAK 164 Dialister invis...
ZP_05843805   63 ATLSYSPESAgfevAQLLNVIFGNSSIqrGIKVIGFAPGATLAARFPGPRFGIAGVRAACGrpeGGLIVPVLKPQGLGAD 142 Rhodobacter sp....
ZP_02168343   67 ATISYSPDSAgeevVQLINVIFGNSSIqqNIRVIDFEPGPEIRKRFSGPRFGIDGVRARTGrvrGGLISPVIKPQGSNVS 146 Hoeflea phototr...
YP_001373335  67 AAISYSEDDIggdfLQFLNIVFGNSSIkpGIKVEDIGLSPGLLDLCKGPRHGIVGLRARAGigeKPLLMSAIKPAGLSTT 146 Ochrobactrum an...
ZP_04429129   94 ASIEYHAHLAsghlAQLMNLLFGNVSLkpGVRLLDVEFPESFLSGLAGPKLGIEGLRSACGvweRPLLATAIKPKGSSVA 173 Planctomyces li...
ZP_01155131   64 ALIGYHVDAVgrelPQLLNVILGNASIlrGVKAVDLAPDAALAERFPGARFGAAGVRRLTGrasGGFVCPVIKPQGSSAE 143 Oceanicola gran...
Feature 1                         ####                                                           
ABH04879     146 ELAKMAYECALGGIDIIKDDHGLTNQVFAPYEERVRLCTQAVAKANQe-----tGFKAIYVPNVTAPYNQLFQRARFAKE 220 Heliobacillus m...
EFB85459     164 ELARMCGAYTRGGADVIKDDHGISNQSFSQYKDRVKRCASMVQEMNTt-----hGTHTLYAANVSGDGTDVLERAYFAKE 238 Veillonella par...
ZP_02001705  145 EIAKLAYDFALGGIDIIKDDHGLSNQPFCPYEHRVKACTEAVANANQk-----tGKNSIYVPNITAPATEIMQRVHYAKH 219 Beggiatoa sp. PS
CAL54456     466 ELAEIAYGFAKGGIDIIKDDHGLADQPYSPYDERIRVCSEAVARANAe-----tGRNVIYAPCINAPAHLIISRAHAARR 540 Ostreococcus tauri
ZP_05734354  165 DFGETAYKLALGGCPLIKDDHSLFNQSYAPFKDRVKACVDSVNNANAk-----tGGRSLYIANCTADSMEFLERAMTAQE 239 Dialister invis...
ZP_05843805  143 ALATLAYAFASAGADIVKDDHGLADQTSAPFRERVEKISAAVARANAe-----tGGSTRYFANVAGKFDQIEGNLRFAAD 217 Rhodobacter sp....
ZP_02168343  147 QLADIARRCVLGGADIIKDDHGLANQRMAPFRERVTAVSEAVGEANAk-----cGGSACYFVNVTGHSGYPIDEAFQAKE 221 Hoeflea phototr...
YP_001373335 147 ELARLAYDFALGGMHFVKDDHGLVDQKTAPFEERLKACIEAVGEANAk-----sGGRTSFVPNITGPATAIIERAKQAQE 221 Ochrobactrum an...
ZP_04429129  174 QLAQIAGEFAAGGGDLVKDDHNLAESTFDAFRTRVEACQQAVLSKTPp------GQKCLYFPNLSGTLRDLERQAAFCVE 247 Planctomyces li...
ZP_01155131  144 TLARLCYLSAVAGADIVKEDHGLANQDAAPFRERIGACAEAVGRANAerrdqgdTTQALYFANLCGPPHQLRDQAYYAKE 223 Oceanicola gran...
Feature 1                                         ##                                    #        
ABH04879     221 VGAQGLMISPALAGLDTMRELADDDSlaLPIFSHPAFQGSYVTsaen----gishFALFGQITRLAGADGVVYPNFGGRF 296 Heliobacillus m...
EFB85459     239 AGATALMVASGLVGFGWLHKLATDEKlrLPIIHHPAYSGGFVSpgvs----gvadYLQLGLLPRIFGADMPIFVSYGGRF 314 Veillonella par...
ZP_02001705  220 QGAGGLLIAPGLTGFDTMRALAEDETvnLPLISHPAFLGSMVTssen----gfshAVLFGQLQRLAGADASIYPNYGGRF 295 Beggiatoa sp. PS
CAL54456     541 AGAGAVLMIPGITGLDAMRELAADSSfnLPIIAHPALLGCMLGggsanriagfshEVLLGLLPRLAGADATVFPSFGGRF 620 Ostreococcus tauri
ZP_05734354  240 LGAGGIMAAPGLLGLSIIRELSSAPDfhLPIFLHPCFSGPLVLsads----gispFCCYGQFSRLAGADAAIFTSFGGRF 315 Dialister invis...
ZP_05843805  218 AGVGGLLVIPGLLGFGLVQRIAADASlnLPVMTHPAFLGSFVQaeds----gishGVLFGTLQRLAGADISVFPNVGGRF 293 Rhodobacter sp....
ZP_02168343  222 AGAGGVLLMPGLVGFGVVYALSRDKSfdLPIMTHPSFTGPFVLtpet----gvdhGLMYGVLQRLAGSDISVFPNVGGRF 297 Hoeflea phototr...
YP_001373335 222 YGAGGVMIAPALAGYDIVRTLAADPDfsLPIVSHPAFSGANVVspdc----gfthRAFFGTLHRLMGADAVVYPNFGGRF 297 Ochrobactrum an...
ZP_04429129  248 SGIRGVLVAPMIAGLETIRHLSESFP--LAILAHPTMSGSFLQegqg-----lshAFWLSTMMRLCGCDGTVFPNTGGRF 320 Planctomyces li...
ZP_01155131  224 SGAHGILLIPGLHGFDAMFELAQDPDfdLPIMAHPSHLGPYVLspdh----gyghGMLFGQLMRLAGADISVFPNHGGRF 299 Oceanicola gran...
Feature 1                                    ###                     ##                    
ABH04879     297 sFSREECRRIAEGTETPmghiqPIFPCPGGGMSLEAIPDMLQVYGRDVTFLIGGGLFRHGPdLVENCRYFREMV 370 Heliobacillus mobilis
EFB85459     315 tFTEEQCKRISSYIKRPmglmkTACPAPGGGVTDARLNELVGLYGNDTMFLVGGDMFRRGPdIEANMSYFVERL 388 Veillonella parvula A...
ZP_02001705  296 gFSREECQGIAESCQENmghypSIFPAPGGGMRLEQVPDMLNLYGNDIIFLIGGALYSHSMdLVDNVQYFLSLV 369 Beggiatoa sp. PS
CAL54456     621 gFSVEECQAINAGCTRPmgnlpAILPSPGGGMTLEKIAQMREVYGPDLLLLIGGSLYSHSDnLIEGARHFMKLA 694 Ostreococcus tauri
ZP_05734354  316 pFTEEVCRKICDGTETEmgglrSIFPVPSGGMKWQLFKKMVQVYGPDAIFLVGGALLTESDdLTANMHFYFEKL 389 Dialister invisus DSM...
ZP_05843805  294 gFTEAECLAIAKACRTPdgpglPMFPSPGGGMSPDRAAAMRAMYGQDVAYLLGGSLLRHPDrIADTIAAMRRVL 367 Rhodobacter sp. SW2
ZP_02168343  298 gFSVEECQSIAKACRDPegvgkAMMPSPGGGMSVERAGDMVSMYGEDVVYLLGGSLLRAGDkIGEAVSAMRDAV 371 Hoeflea phototrophica...
YP_001373335 298 gFTREECQSIAKTCSVDmggpkAIVAAPGGGMTFARIPEMREAYGNDIMYLVGGALLSEPD-LVSACKRLVAAT 370 Ochrobactrum anthropi...
ZP_04429129  321 sFSQADCLSIADAARKPlgrlkSCFPAPAGGMSYASLPGMARDYGPDTIFLVGGGLLGYSEnLADSTAAFRSRI 394 Planctomyces limnophi...
ZP_01155131  300 gFSVDECEEIVRACRDPeglgpAILPSPGGGMSPERLPDMMAQYGEDCVYLLGGSLLRAGDrIGELIAEMRAAL 373 Oceanicola granulosus...

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