Conserved Protein Domain Family
LARP_5

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cd08036: LARP_5 
La RNA-binding domain of La-related protein 5
This domain is found in vertebrate La-related protein 5 (LARP5). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Statistics
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PSSM-Id: 153405
View PSSM: cd08036
Aligned: 4 rows
Threshold Bit Score: 139.772
Threshold Setting Gi: 194332471
Created: 6-Aug-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
RNA binding
Feature 1:RNA binding site [nucleic acid binding site]
Evidence:
  • Comment:by similarity to other members of this family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #  ##    #  ## #                  ###                                
Q92615       157 REVLKKTLEFCLSRENLASDMYLISQMDsdQYVPITTVANLDHIKKLSTDvDLIVEVLRSLplVQVDEkgEKVRP 231 human
NP_001071030 145 REQLKATLEFCLSRENLANDMYLISQMDsdQYVPIVTLANLDQIKKLTTDvDLISDILKTLplVQVDKcgEKVRP 219 zebrafish
XP_418559    145 RELLKKTLEFCLSRENLASDMYLISQMDsdQYVPIMTVANLDHVKKLSTDmDLIVEVLRSLplVQVDEkgEKVRP 219 chicken
NP_001123740 145 RDLLKKTLEFCLSRENLASDMYLISQMDsdQYVPIMTVANLDLVKKLSTDmDLIVDVLRSLplVQVDEkgEKVRP 219 western clawed frog

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