Conserved Protein Domain Family
LARP_5

cd08036: LARP_5

La RNA-binding domain of La-related protein 5

This domain is found in vertebrate La-related protein 5 (LARP5). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.

Links

Source:	cd08031
Taxonomy:	Euteleostomi
PubMed:	1 link

Protein:	Representatives
	Specific Protein
	Related Protein
	Related Structure
	Architectures
Superfamily:	cl02755

Statistics

PSSM-Id:	153405
Aligned:	4 rows
Threshold Bit Score:	139.772
Created:	6-Aug-2009
Updated:	2-Oct-2020

Structure

Conserved Features/Sites?
PubMed References ?

RNA binding

Feature 1:RNA binding site [nucleic acid binding site]

Evidence:

Comment:by similarity to other members of this family
Citation:PMID 16387655

Scroll to Sequence Alignment Display

Sequence Alignment

include consensus sequence

Format: Row Display: Color Bits: Type Selection:

Feature 1              #  ##    #  ## #                  ###                                
Q92615       157 REVLKKTLEFCLSRENLASDMYLISQMDsdQYVPITTVANLDHIKKLSTDvDLIVEVLRSLplVQVDEkgEKVRP 231 human
NP_001071030 145 REQLKATLEFCLSRENLANDMYLISQMDsdQYVPIVTLANLDQIKKLTTDvDLISDILKTLplVQVDKcgEKVRP 219 zebrafish
XP_418559    145 RELLKKTLEFCLSRENLASDMYLISQMDsdQYVPIMTVANLDHVKKLSTDmDLIVEVLRSLplVQVDEkgEKVRP 219 chicken
NP_001123740 145 RDLLKKTLEFCLSRENLASDMYLISQMDsdQYVPIMTVANLDLVKKLSTDmDLIVDVLRSLplVQVDEkgEKVRP 219 western clawed frog

Citing CDD

Jiyao W et al.(2023). "The conserved domain database in 2023.", Nucleic Acids Res. 51(D1):D384-D388.

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Conserved Protein Domain FamilyLARP_5

Conserved Protein Domain Family
LARP_5