Conserved Protein Domain Family
LA_like_fungal

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cd08029: LA_like_fungal 
La-motif domain of fungal proteins similar to the La autoantigen
This domain is found in fungal proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Statistics
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PSSM-Id: 153398
View PSSM: cd08029
Aligned: 15 rows
Threshold Bit Score: 123.95
Threshold Setting Gi: 223640694
Created: 3-Sep-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
RNA binding
Feature 1:RNA binding site [nucleic acid binding site]
Evidence:
  • Comment:by similarity to other members of this family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #  ##    #  ## #                    ###                                   
P87058        64 EAEVLKQVEFYFSDTNLPHDKFLWttsq-kndGWVPIQTIANFKRMRRFQPL---EAIVNALRKSpe------lLEVDEa 133 fission yeast
XP_001730491  22 KSAVLKQVEFYFADANLPFDKFLFtltrkdpeGWVPIDTIASFKRMKPMREVlssQDIAEALRGSts------lLEVDSd 95  Malassezia glob...
XP_759871     35 KEEALRQVEFYFHDSNLPFDKFLFtltrkdpeGWVPIATIASFKRMRAIKDLlgiEGIAQVLRGSke------lLDVSEd 108 Ustilago maydis...
XP_570946     58 LTKAAKQVRFYFSDSNLPVDKYFFsltccnaeGWVPIKTISTFKRMKDFQSLg-vPFVAYALRLSikedgndplVAVSEd 136 Cryptococcus ne...
XP_001935260 112 PEEIRSQVEFYFSRANLASDHHMFmetegpknKPVSIHHVCTFSRMRRFKPY---SAVVAALRDSk-------dLVVVDd 181 Pyrenophora tri...
XP_001804270  38 GDSIRRQVEFYFSDENLPTDLHLLqccggrdnNPVSVSRIVGFKKMRSYKPK---ALVVTALRQSs-------lLEVSTd 107 Phaeosphaeria n...
EED82858      69 MLDAMRQIEFYFADSNLPFDKFMWtlhtanaeHWVPIKQVSSFKRMREYQPLg-lEWITNALRLSe-------eLEVSEd 140 Postia placenta...
XP_363593    108 PNEIRKQVEFYFSDSNLSQDKFLWtqvggtenKPMKLSVIHNFGRMRRFKSY---EAVVAALRESk-------vLDVAGe 177 Magnaporthe gri...
XP_962508     82 PVKIRNQVEFYFSDSNLPTDKFMWettggvenKPVSLKTICSFKRMQMFQPY---SAVVAALKESa-------fLDVSGe 151 Neurospora cras...
XP_001833914  56 MEKARQQVEFYFADSNLPYDKFMWtlhtkdpeHWIPLSTIASFKRMREYTALg-aEFVLNALRPSt-------fLELDEs 127 Coprinopsis cin...
Feature 1                      
P87058       134 --------gEKVRR 139 fission yeast
XP_001730491  96 --------gKRVRR 101 Malassezia globosa CBS 7966
XP_759871    109 --------gANVRR 114 Ustilago maydis 521
XP_570946    137 --------gENVRR 142 Cryptococcus neoformans var. neoformans JEC21
XP_001935260 182 geys-kpgsEAVKR 194 Pyrenophora tritici-repentis Pt-1C-BFP
XP_001804270 108 --------gKTIKR 113 Phaeosphaeria nodorum SN15
EED82858     141 --------gTQVRR 146 Postia placenta Mad-698-R
XP_363593    178 a------geETIVR 185 Magnaporthe grisea 70-15
XP_962508    152 e------gqETVKR 159 Neurospora crassa OR74A
XP_001833914 128 gregaelagVRVRR 141 Coprinopsis cinerea okayama7#130

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