1H6E,3G9H,1W63,3L81,4IKN


Conserved Protein Domain Family
AP_MHD_Cterm

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cd07954: AP_MHD_Cterm 
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C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)
This family corresponds to the C-terminal domain of heterotetrameric AP complexes medium mu subunits and its homologs existing in monomeric stonins, delta-subunit of the heteroheptameric coat protein I (delta-COPI), a protein encoded by a pro-death gene referred as MuD (also known as MUDENG, mu-2 related death-inducing gene), an endocytic adaptor syp1, the mammalian FCH domain only proteins (FCHo1/2), SH3-containing GRB2-like protein 3-interacting protein 1 (SGIP1), and related proteins. AP complexes participate in the formation of intracellular coated transport vesicles and select cargo molecules for incorporation into the coated vesicles in the late secretory and endocytic pathways. Stonins have been characterized as clathrin-dependent AP-2 mu chain related factors and may act as cargo-specific sorting adaptors in endocytosis. Coat protein complex I (COPI)-coated vesicles function in the early secretory pathway. They mediate the retrograde transport from the Golgi to the ER, and intra-Golgi transport. MuD is distantly related to the C-terminal domain of mu2 subunit of AP-2. It is able to induce cell death by itself and plays an important role in cell death in various tissues. Syp1 represents a novel type of endocytic adaptor protein that participates in endocytosis, promotes vesicle tabulation, and contributes to cell polarity and stress responses. It shares the same domain architecture with its two ubiquitously expressed mammalian counterparts, FCHo1/2, which represent key initial proteins ultimately controlling cellular nutrient uptake, receptor regulation, and synaptic vesicle retrieval. They bind specifically to the plasma membrane and recruit the scaffold proteins eps15 and intersectin, which subsequently engage the adaptor complex AP2 and clathrin, leading to coated vesicle formation. Another mammalian neuronal-specific protein SGIP1 does have a C-terminal MHD and has been classified into this family as well. It is an endophilin-interacting protein that plays an obligatory role in the regulation of energy homeostasis. It is also involved in clathrin-mediated endocytosis by interacting with phospholipids and eps15.
Statistics
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PSSM-Id: 271157
Aligned: 8 rows
Threshold Bit Score: 207.643
Created: 30-Sep-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1H6E_A  25 ELFLDVLESVNLLMsp-qGQVLSAHVSGRVVMKSYLsg------mPECKFGMNdkiviekqgkgtadetsksgkqsiaID 97  human
Q9H0R1 208 QVSISITEKVKSMQydkqGIADTWQVVGTVTCKCDLeg-----imPNVTISLSlptn------------------gspLQ 264 human
3G9H_A  69 GLNASIAEVLNASFk--dGMLQNSQLIGEIALNYLPnsvmnsplpIGINLRINng---------------------akFE 125 baker's yeast
1W63_M 170 EVFLDVIEAVNLLVsa-nGNVLRSEIVGSIKMRVFLsg------mPELRLGLNdkvlfdntg--------rgksksveLE 234 house mouse
3L81_A  34 EVFLDVVERLSVLIas-nGSLLKVDVQGEIRLKSFLps------gSEMRIGLTeefsvgkse-------lrgygpgirVD 99  human
Q8WXE9 570 EITVDVRDEFSGIVskgdNQILQHHVLTRIHILSFLsg------lAECRLGLNdilvkgneivlrqdimpttttkwikLH 643 human
P48444 273 SVHMKIEEKITLTCgr-dGGLQNMELHGMIMLRISDdk------yGRIRLHVEned--------------------kkGV 325 human
4IKN_A  21 EAYFDVVEEIDAIIdk-sGSTVFAEIQGVIDACIKLsg------mPDLSLSFMnp---------------------rlLD 72  Norway rat
1H6E_A  98 DCTFHQCVrlsk----------------fdseRSISFIPpd---gEFELMRYRTtkd--------iilPFRVIPLVREvg 150 human
Q9H0R1 265 DILVHPCVtsldsailtsssidamddsafsgpYKFPFTPpl---eSFNLCFYTSqvp---------vpPILGFYQMKEee 332 human
3G9H_A 126 KVILNQAFier------------------vapEEFKVNPsfidsrTLGAIKYSIkep---------iaPIVIHPVWRFes 178 baker's yeast
1W63_M 235 DVKFHQCVrlsr----------------fendRTISFIPpd---gEFELMSYRLnth--------vkpLIWIESVIEKhs 287 house mouse
3L81_A 100 EVSFHSSVnlde----------------feshRILRLQPpq---gELTVMRYQLsddl------psplPFRLFPSVQWdr 154 human
Q8WXE9 644 ECRFHGCVdedv----------------fhnsRVILFNPld--acRFELMRFRTvfae-------ktlPFTLRTATSVng 698 human
P48444 326 QLQTHPNVdkkl----------------ftaeSLIGLKNpe---kSFPVNSDVGvlkwrlqtteesfiPLTINCWPSEsg 386 human
4IKN_A  73 DVSFHPCIrfkr----------------weseRVLSFIPpd---gNFRLISYRVssqn------lvaiPVYVKHNISFke 127 Norway rat
1H6E_A 151 r-tkLEVKVVIKSnfkp--------sllAQKIEVRIPTPln------------tSGVQVIcm------------------ 191 human
Q9H0R1 333 --vqLRITINLKLhesv--------knnFEFCEAHIPFYnrg----------piTHLEYKts------------------ 374 human
3G9H_A 179 --hqASVVLTVKMspslpd---eisqivIEDLVVFVNIDga-----------naTSALSKp------------------- 223 baker's yeast
1W63_M 288 h-srIEYMVKAKSqfkr--------rstANNVEIHIPVPnd------------aDSPKFKtt------------------ 328 house mouse
3L81_A 155 gsgrLQVYLKLRCdlls--------ksqALNVRLHLPLPrg------------vVSLSQElss----------------- 197 human
Q8WXE9 699 --aeVEVQSWLRMstgfsanrdpltqvpCENVMIRYPVPsewvknfrresvlgeKSLKAKvnrgasfgstsvsgsepvmr 776 human
P48444 387 --ngCDVNIEYELqed---------nleLNDVVITIPLPsg------------vGAPVIGei------------------ 425 human
4IKN_A 128 nsscGRFDITIGPkqnm--------gktIEGITVTVHMPkv------------vLNMNLTpt------------------ 169 Norway rat
1H6E_A 192 --kgKAKYKAsenAIVWKIKrma-----gmkESQISAEIELlptndk---------kkwarpPISMNFEVPfa------- 248 human
Q9H0R1 375 --fgQLEVFReksLLIWIIGqkfp----ksmEISLSGTVTFgakshekqpf--dpictgetaYLKLHFRILdy------- 439 human
3G9H_A 224 ----QGSFSKekkRITWRFKepvvl-trngeGQRLIARFITdglah------------esakGVITKFTISetdnvalph 286 baker's yeast
1W63_M 329 --vgSVKWVPensEIVWSVKsfp-----ggkEYLMRAHFGLpsveae---------dkegkpPISVKFEIPyf------- 385 house mouse
3L81_A 198 -peqKAELAEg--ALRWDLPrvq-----ggsQLSGLFQMDVpgppgppshglstsasplglgPASLSFELPrh------- 262 human
Q8WXE9 777 vtlgTAKYEHafnSIVWRINrlpdknsasghPHCFFCHLELgsdrev---------psrfanHVNVEFSMPtt------- 840 human
P48444 426 --dgEYRHDSrrnTLEWCLPvida----knkSGSLEFSIAGqpn---------------dffPVQVSFVSKkn------- 477 human
4IKN_A 170 --qgSYTFDPvtkVLAWDVGkit-----pqkLPSLKGLVNLqsgapk----------peenpNLNIQFKIQql------- 225 Norway rat
1H6E_A 249 ---pSGLKVr--YLKVfepklny-sdhdviKWVRYIGRSGIYETR 287 human
Q9H0R1 440 --tlTGCYAdqhSVQVfasgkpkisahrklISSDYYIWNSKAPAP 482 human
3G9H_A 287 sgagSGITL---TCQEldennpf-ggewldVNTKRTLTTGNYHGL 327 baker's yeast
1W63_M 386 --ttSGIQVr--YLKIieksg-----yqaiPWVRYITQNGDYQLR 421 house mouse
3L81_A 263 --tcSGLQVr--FLRLafrpsg---nanphKWVRHLSHSDAYVIR 300 human
Q8WXE9 841 --saSKASVr--SISVedkt-------dvrKWVNYSAHYSYQVAL 874 human
P48444 478 ---yCNIQVt--KVTQvd----------gnSPVRFSTETTFLVDK 507 human
4IKN_A 226 --aiSGLKVn--RLDMygek------ykpfKGVKYITKAGKFQVR 260 Norway rat
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