Conserved Protein Domain Family
PhnC_Bs_like

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cd07368: PhnC_Bs_like 
PhnC is a Class III Extradiol ring-cleavage dioxygenase involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway.
This subfamily is composed of Burkholderia sp. PhnC and similar poteins. PhnC is one of nine protein products encoded by the phn locus. These proteins are involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway. PhnC is a member of the class III extradiol dioxygenase family, a group os enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Statistics
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PSSM-Id: 153380
View PSSM: cd07368
Aligned: 3 rows
Threshold Bit Score: 464.712
Threshold Setting Gi: 75424697
Created: 21-Apr-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:Fe(II) binding site [ion binding site]
Evidence:
  • Comment:based on similarity to other members of the same protein family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #                                            #                       
Q9ZHH5         1 MAKIVGGFMMPHDPLIPATPTAPPAaqREICMHAYAIIVERLRALQVDTVVVIADDHYTLNGPyCIPMAMIGIGDIEGPY 80  Burkholderia sp...
YP_286448      1 MGKIVGGFLVPHDPVMFVIPDAPAPdvAKRMWSAFETCAERLAALNATSVVIIGADHYFNFGTgCLPQYLIGTGDVDGPL 80  Dechloromonas a...
YP_002801323   1 MGKIVGGFWMPHDPVMFVAPEAPPQaqRDKVWGAYQDCARRLAELEPTSVIVVGCDHYILFGThCLPRYLIGTGDVDGPI 80  Azotobacter vin...
Feature 1                                                                                        
Q9ZHH5        81 EPwLGIPRAQIENNRPLAHHIMQYGLEYGIDWAVSKSLVLDHSATVPIHYAVRPV-----KGMRAIPVYLNTGIEPFITS 155 Burkholderia sp...
YP_286448     81 DVlPGLKRQVIPASEKLASFIAEHGHDNGFDWAVARAFTVDHAVAIPDRLIVDPVra-kgQAIGTIPVYIAAGVDPFIKM 159 Dechloromonas a...
YP_002801323  81 DRlPGLNREVVINHEALANHIVAHGEAQGIDWSVARSFTVDHAFSIPHQLVVRPAeqlmgRRLPSIPVYLACGVDPFISF 160 Azotobacter vin...
Feature 1                                                                                        
Q9ZHH5       156 WRAHEIGRVIGDAVANwQGDERVAIYGTGGLSHWPGMAEMGAINEGWDRKIMKLVAQGDVESLiALSDEEILRDGGNGGI 235 Burkholderia sp...
YP_286448    160 KRAIELGGAIKAAVEAmPDDERVVVIGSGGISHWVGTPEMGKVNEAFDHEIMGYACAGDLAAMqALSDDYILENGGNGGM 239 Dechloromonas a...
YP_002801323 161 ERAADLGRQIRAAVEAfDADERVAIIGSGGISHWVGTAETGRVNEDFDREVLDIGERGDLAALcAYRNEEILERGGNGAM 240 Azotobacter vin...
Feature 1        #                                     
Q9ZHH5       236 EIKNWICAMGALGACRGEVIAYEPVaEWVCGCGYMEMK 273 Burkholderia sp. RP007
YP_286448    240 EIRQWAVAMGAMPGAKGEIIDYAPVrEWVTGLGFVQLF 277 Dechloromonas aromatica RCB
YP_002801323 241 EIRNFACAMAAVPNARGETIAYEAVpAWVTGLGFLQLH 278 Azotobacter vinelandii AvOP

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