Conserved Protein Domain Family
M56_BlaR1_MecR1_like

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cd07326: M56_BlaR1_MecR1_like 
Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase
This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain ?-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.
Statistics
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PSSM-Id: 320685
Aligned: 107 rows
Threshold Bit Score: 76.5765
Created: 4-Mar-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative active
Feature 1:Zn binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       #
EST19384     116 TRRKQRRRELLvrspllp-----gedsggGPLVVLEg-----ERPGAWWLPga--aPQLVITTAALRRLKGRQLDAVLAH 183 Streptomyces ni...
WP_011637974 121 VRRHSIAMHNLfkfsdmq----piscdnnQTIYSIAl-----SIPAAFTIGll--kPRVYLTTGLLQQLEPSALDIIIQH 189 Shewanella frig...
WP_045859474 119 TKAIYTNKKLNqleff--------iqnanSKQALRVies-eeSRAFTSGFFs----PRSYITSGLSNQLTSQEVTVVTEH 185 Alteromonadacea...
WP_007984382 113 LRHVYELKKHRdslrsavliaesrectfqGHTFTRLe----tNIPLAFTAGgf--rPRVYLSSGLIARFTPQQLHCILAH 186 Glaciecola chat...
WP_007622816 110 TQLYRQSNAIYtlkhfsm-----tedhaqIQRGVQIid---sDIPTAFTSGff--rPICYVAKGLADKLNDKELNIVIEH 179 Glaciecola arctica
WP_024462533 117 VFLFREFKAARdttal--------lalsrGHGRLRRl-----DTPKAFACTagyrhPALFMTRGLTDRLDHRERRIVLAH 183 Marinimicrobium...
WP_028886216 116 LIVVRSVPIWQlqaksr------tfqrlvQGKSLRNtl--ddERPLAFALGgw--kPSIFISKGLRELLSPKEMRIVVSH 185 Teredinibacter ...
WP_027328306  69 YRHRRQSTRLCalta-----------lsrGKGVLRVldd-srLMAFAAGGTa----PHIYLSQGLLGELTPRERRMVIAH 132 Marinimicrobium...
KHD11991     119 KDGLQQSVAMSnlidft-------natptVTESLVVyyslpfKAPAAFTAGll--sPKIYLTTALLDHINQQELDIIVRH 189 Candidatus Thio...
ABM03174      57 ISALRYFQRAQklfkrld-----lvsevgPESNVKIie---sPVPLAFSLGif--kPITVLSTGLKNQLSPRQVRIVSIH 126 Psychromonas in...
Feature 1           #                                    #                                       
EST19384     184 EQGHARARHDWLLHCSSAlangfPQVPVFAAFQAEMHRLVELAADDVASRRFGRl-tIALALVELNEdrg---------- 252 Streptomyces ni...
WP_011637974 190 ELAHVRARDPLFKSIYSFfc-llYPKPIRRILQQHFTLLTEQQADSVVTGYHDNl-dVAQTLISVAKkqrqfp------- 260 Shewanella frig...
WP_045859474 186 ELAHARRHDPLRKYIFSLfa-afFPTIIARQLNREFSLALEQVADQDVLPTVNDvtvIAKTLLKVSKlshr--------- 255 Alteromonadacea...
WP_007984382 187 EVAHKTHRDPLQTWVFSLms-awYPSALRREMRQAFELATEMKADAVAGRETGAl-nVASALVAYGKsdtrw-------- 256 Glaciecola chat...
WP_007622816 180 EFAHARNRDPLTKLLIAFls-ayYPKKLAQLLNTKYALLTEHIADQSTVLLHSAe-dVAATLVKVVRlnsaspk------ 251 Glaciecola arctica
WP_024462533 184 EVAHLRRRDPLRNLVFNVll-laHWPSSARSLCALLRQRMEEQADDRAACRFGPe-aVAATLIKVARlsgp--------- 252 Marinimicrobium...
WP_028886216 186 EVAHVRHKDVNKNALFEMl---lTLHAFPRLLRSSWNLTSELRADRYVAQKFDAl-eVADVLLKLRRatth--------- 252 Teredinibacter ...
WP_027328306 133 EAAHIRYRDLQAGALLETll-llHFKPFAQALRHLWHEAIELRADERVARRFGKt-dTAELLLRFAQgtqa--------- 201 Marinimicrobium...
KHD11991     190 ELAHVESRDPLYKAIFSAla-cfFPVVTKRKLIEHFTLLTEQMADYSVTATYDNl-dVAQTLVNVARmqrveseqinrvg 267 Candidatus Thio...
ABM03174     127 EEVHTKYRDGLSKLLMQAic-tfHFTSAQKYILEQHALVLEMRADQLAAQIIQSnldVAETILTVKKlmspea------- 198 Psychromonas in...
Feature 1                                       
EST19384     253 ---vfgPCPAPDGEl------pRRVDRLLTP 274 Streptomyces niveus NCIMB 11891
WP_011637974 261 qscegsLVSHFSHDqi-----tLRVQKLLSP 286 Shewanella frigidimarina
WP_045859474 256 ---sfgKKMAASNChfsthpltLRIEYLLSD 283 Alteromonadaceae bacterium Bs12
WP_007984382 257 -qlpmvMGFGQHGVs-------LRVKNLIQP 279 Glaciecola chathamensis
WP_007622816 252 nesntsLSFFGADDi------sLRVHQLLTP 276 Glaciecola arctica
WP_024462533 253 ---sptGSLSASGGql-----lPRIHRLLHA 275 Marinimicrobium sp. LS-A18
WP_028886216 253 --spfpTSIHGGQLs-------ERIDALIHD 274 Teredinibacter turnerae
WP_027328306 202 --apvpTAFGGGNLt-------LRIQTLLKT 223 Marinimicrobium agarilyticum
KHD11991     268 chgiqtSHFGNDQTs-------VRVHRLLNP 291 Candidatus Thiomargarita nelsonii
ABM03174     199 -qteplCQFLASELe-------QRVHYLLAP 221 Psychromonas ingrahamii 37

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