Conserved Protein Domain Family
ALDH_PhdK-like

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cd07107: ALDH_PhdK-like 
Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Statistics
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PSSM-Id: 143425
View PSSM: cd07107
Aligned: 11 rows
Threshold Bit Score: 737.262
Threshold Setting Gi: 187478401
Created: 14-Dec-2008
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:catalytic residues [active site]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
BAA23265      29 ISDPSTGRYLTQVPDcaeaDVDRAVQASRQAQAEWgalPPRARAAKLRELITLLREHREEFAMLDAIDGGFPIsMMRNDV 108 Nocardioides sp.
YP_001072474  39 ITAPHDGSTIARVPAaspaDVDAAVAAAAAAFPQWratTLLERAEMIRSFAQRLRSRATDFGLLDAVDTGNPVtAMIGDV 118 Mycobacterium s...
YP_001116748  40 TLNPANGLPVASVAHasadDAEAAIERAHEAWLDWrgtAPAKRQRMLHEAASLLREHAEEFAMIDAINTGNPVaEMVGDA 119 Burkholderia vi...
YP_718191     37 TLSPGSGRSICDVAQatapDVDAAVAAARSAFPAWqavLPLERARILRSIADVIRRHSRELVEIDAENCGNPVsELMGDA 116 Sphingomonas sp...
ZP_01226527   36 LTSPGTGQSLGTVAEagaaDAEAAIAAAKAAFREWrdvTPNERAKILRSIAAIVRENARELATIDAADCGNPMtAMLGDA 115 Aurantimonas sp...
YP_786425     36 VEAPGTGERLTRVAKatadDVALATKAAREGFQIWrktPPLARAAVLRRIGQRLREHAAELALLDALDCGNPVsEMGSDV 115 Bordetella aviu...
YP_760915     31 VRSPATDELLCTINVgsaaDVRPAVEAAHKGYLEWrdvRPMERARLMKEMGVRIRSNARELALIESMDGGNPIsEMMGDV 110 Hyphomonas nept...
YP_951372     21 VEDPCTGDVLTQVPDcsseDVDRVVATAHAAQRDWalrTPRQRGTALRALATLMRDHSEELALLDAIDGGFPLpAMRDDV 100 Mycobacterium v...
YP_368612     27 SINPATEAVIGRAPAgsrrDVARAVDAAQRAWPAWaerTGEERGELLRGFGERLLERAEELSRIEVLDSGNTYvPTLASM 106 Burkholderia sp...
YP_608184     27 SINPANEQVIGRAPAgtrrDVERAVDAARRAWPAWaerTGEERGELLRTFGERIQARAEELSRIEVLDSGNTYsPTLASM 106 Pseudomonas ent...
ZP_01895818   42 TINPSTDQPLADVPFataeDVKSAVASAKAAFPGWkklHVDERGKMLKALSRAVRERAEMFGMLDALDCGNPYqAMVDDA 121 Marinobacter al...
Feature 1                                                                                        
BAA23265     109 DAALELMDIFADMAldlgGKTIPvs-tNLHFTTHEPFGVVARIGAFNHPFFFAASKVAAPLMAGNSVILKAPDqtPLSSL 187 Nocardioides sp.
YP_001072474 119 MMAARWLDYHAAVAfsitGDTLPsmtrSWLMTRKEPYGAVARIIPYNHPILFAAAKVGAPLITGNTLVLKVPDqaPLSSL 198 Mycobacterium s...
YP_001116748 120 MVAADSLDFFAGLVpmlkGETIPvdgnSLHYSLREPLGVVARIVAYNHPLMFAAGKVAAPLAAGNTVIVKPPEqaPLSCL 199 Burkholderia vi...
YP_718191    117 ATAIAMLEFFAGLVtemkGQSIPsgpnAVNFSLRQPMGVVARILAFNHPFMFCAAKIAAPLAAGNTVIVKPPEqaPLSAL 196 Sphingomonas sp...
ZP_01226527  116 DIASAQLDFFAGLVtemkGASIPmgpgSVNFSLREPHGVVTKIMPFNHPFMFCAGKIAAPLAAGNTVVVKPPEqaPLSSL 195 Aurantimonas sp...
YP_786425    116 MVAAALMDFFAGLVtelkGDTIPmgheALNYTEREPVGVVARIVAFNHPLLFAMGKLAAPLAAGNAVIIKPPAqaPLSAL 195 Bordetella aviu...
YP_760915    111 LGTAAMLDYFAGLVtemkGSSVPygpeAVSFSVREPYGVVARIAPYNHPLGFSVAKAAAPLAAGNAVVVKPPEqaPLSAL 190 Hyphomonas nept...
YP_951372    101 TWAADVLELMADDAldlgGRTIPls-aNLHYTLQQPYGVVARIVPFNHPVLFAGSKIAAPLMAGNAVVLKAPDqtPLSAI 179 Mycobacterium v...
YP_368612    107 HETVRSLRYYAGLVhglhGETIPatgrNLHMTVYEPYGVVGRIAAFNHPAMFSAARTASALVTGNTVVVKPPEtsPLSVL 186 Burkholderia sp...
YP_608184    107 HETVRSLRYYAGLIhglhGETIPatgrHLHMTVHEPYGVVGRIAAFNHPAMFSAARTASALVTGNTVVVKPPEtsPLSVL 186 Pseudomonas ent...
ZP_01895818  122 NKGAGLLEHFSNLGmelkGQTVPtpggGLNYTRLEPFGVVARILPFNHPISFAVGKIASALIAGNTVVMKIADqtPLSAL 201 Marinobacter al...
Feature 1                                                                        #               
BAA23265     188 RLAEVAAeVLPQNLLITISGRGrvaGRAIVRHPqIKRIGFIGSTDTGRSIQRDAAevaVKHISLELGGKNAQIVFADADL 267 Nocardioides sp.
YP_001072474 199 LMAEVVLeSFPPGVVNIISGSGavaGDALVRHRdVKRIALIGSVPTGQKVMAAAAeagIKHVTLELGGKNAMIVCPDADP 278 Mycobacterium s...
YP_001116748 200 RLAEVLRdVFPPGVLNILPGGRe-cGQTLASHPlVKKVTLIGSVNTGRAILRGAAd-tIKPTLLELGGKNALIAFPDADI 277 Burkholderia vi...
YP_718191    197 RLAELLEdVLPPGVFNVLPGGSe-aGSALAEHPhVAKVSVIGSVAAGRNVMRAASe-tIKPVLLELGGKNALIAFPDADP 274 Sphingomonas sp...
ZP_01226527  196 RFAELIDgLLPPGVFNLLPGGRe-vGEVLSGHRdVAMVSLIGSVRTGQAVMRSAAe-tIKPLLLELGGKNALIAYPDADP 273 Aurantimonas sp...
YP_786425    196 RCAELIGdLLPPGVLSILPGDGp-aGAALAASAdVDMIGLVGSIDTGRKVMQAAAd-rIKPLALELGGKNPFVACADVDP 273 Bordetella aviu...
YP_760915    191 RAAELFDgLLPAGVFNVLSGDRd-lGAALVSDPgISIVALVGSVPTGKAVMRAAAd-sLKRVMFELGGKNALIAFPDSDP 268 Hyphomonas nept...
YP_951372    180 RLAELAReVLPEGLFGVVTGHGataGAALVAHPlVRRIGFIGSPGTGRHIQRLAAehgVKYVTLELGGKNPMIVMPDADL 259 Mycobacterium v...
YP_368612    187 VLGEVARdTLPAGVFNIVNGTGaevGDALVRHPdVKRLALIGSVATGQAIQRSAAevgVKHVTLELGGKNPMIVFPDADP 266 Burkholderia sp...
YP_608184    187 LLGEIAReVLPPGVFNIVNGTGqevGDALVRHPeVKRIALIGSVPTGMAIQRSAAqvgIKHVTLELGGKNPMIVFPDADL 266 Pseudomonas ent...
ZP_01895818  202 LFGKLIQeHLPPGVVNVITGDGattGASLVSHPdIHRIAFTGSVATGNLISQQAG---IAVLSLELGGKNPLIIYPDVDV 278 Marinobacter al...
Feature 1                         #  #                                                           
BAA23265     268 EQAALGAVNGMNFTWtaGQSCGSTSRLLVHesVADQVIARVVELVSAIa-vGPPLDenaQMGPLVSQAQYDKSVHAIGEg 346 Nocardioides sp.
YP_001072474 279 SAVVEGAAFGMNCHWsqGQSCGSTTRLFLHesLHDQVVSGLVERLKSIr-iGHPLDpatEMGCLVSEAQFDKVNHYIDVa 357 Mycobacterium s...
YP_001116748 278 KALIHGIARGMNFTWa-GQSCGSTSRVFLHdsIHDQVLESVATYVRETyvpGVPTDaatTMGPLISAQRRDEVMDFIASa 356 Burkholderia vi...
YP_718191    275 EAVADAMVQGMNFGWc-GQSCGSTSRAYVQeaIYETVLGLLPDRIGRYk-pGVPTDpgtTMGALISENHLDRVLDYIASa 352 Sphingomonas sp...
ZP_01226527  274 REVARALAAGMNFTWc-GQSCGSTSRGFIHaaIYEDVLAHLAEACAAYr-pGIPTDpstTMGAIVSRMQYERVKEFIAAs 351 Aurantimonas sp...
YP_786425    274 VLAARAIVDGMNFTWc-GQSCGSTSRAFVHraIYDEVCEQVAQACAAYv-pGDPTDpatTMGAMISAQHRDRVKKAIDEa 351 Bordetella aviu...
YP_760915    269 EKIARAMVAGMNYTWc-GQSCGSVSRAFVHedIYDEVLARMPQYLEKHk-pGLPSDpktTMGALVDRQALDRVTRYIASa 346 Hyphomonas nept...
YP_951372    260 EAAAKSAVVGMNFTTtaGQSCGSTSRLLLHeaIADEVIDLVVDQVAAIk-vGDPLVdgtDMGPVIDQAQYSKSLRAIESg 338 Mycobacterium v...
YP_368612    267 DAAADSAVRGMNFSWq-GQSCGSNSRLLVHddIYDDVLARVVERVAAIr-vGDPMSpdtGMGPINSRKSYDHVMSFLDPa 344 Burkholderia sp...
YP_608184    267 DAAADSAVRGMNFSWq-GQSCGSNSRLLVHesIYEALLQRVVEKVAAIk-vGDPMAldtGMGPINSAKSYAHVMSFLDPa 344 Pseudomonas ent...
ZP_01895818  279 QKVADAAVAGMNFTRsqGQSCGSNSRVFVHrdLHDEFVSEVVKRVEKIk-vGHADAddtEMGPVVTRQHYDRVMHYIDSa 357 Marinobacter al...
Feature 1                                                                                        
BAA23265     347 irEGAKVVAGGGRPegv-geGGWYLAPTVLADVrpgsFIEQNEIFGPVLSVIIFAtDDEAVAIANGVEYGLTASVWTSDI 425 Nocardioides sp.
YP_001072474 358 krEGARLVTGGGRPpgkefeAGFYVEPTVFADVdmsmTVAREEIFGPVLSVLRFTdLDAAVAQANELPLGLTGAIWSNDI 437 Mycobacterium s...
YP_001116748 357 trEGARLVTGGKAPdtpelrGGYYIEPTIFSDVtasmRIAREEIFGPVMSVFRWKdEEELFKVVNGTEFGLTASIWTSAL 436 Burkholderia vi...
YP_718191    353 kaEGARLLTGGGRPsdpvlsGGYYLEPTVFCDVtssmRIAREEIFGPVLSVLKWTdEQEMLAQVNALDFGLTCSIWSRDI 432 Sphingomonas sp...
ZP_01226527  352 kaEGARLVAGGGHPsdpaleDGFFIEPTVFADVtptmRIAREEVFGPVLAIAPWRdEAAMLEEVNAVEYGLTCSIWTDDL 431 Aurantimonas sp...
YP_786425    352 rtAGARLLYGGGIPqtgvppGGHYLEPTVFCDVaahsALAREELFGPVLAILPWDeEATLLAEIQALDVGLTAAIWTTDL 431 Bordetella aviu...
YP_760915    347 heDGARLIHGGVPPedpalaKGCFMPPTVFADVtmgmKIAREEIFGPVQAVIKWSdEAEMLRQVNQVEYGLTCAVWTRDV 426 Hyphomonas nept...
YP_951372    339 raGGASVLTGGGRAqgv-gsKGWYVAPTVLAGVapqaDVARDEIFGPVLSVLTVRdEAEAVEVANSVEFGLTAAVWTNDV 417 Mycobacterium v...
YP_368612    345 qtHGARLMTGGRRPpghafeKGFWVEPTVYADVtpgmRLWREEVFGPILSVARWRdVDEVVAMANDTEYGLSAAIWTNDI 424 Burkholderia sp...
YP_608184    345 qtKGARLMTGGRRPtgaafaKGFWVEPTVYADVlpgmRLWREEVFGPVLSVSKWRgFEQVIDMANDTEYGLSAAIWTRDI 424 Pseudomonas ent...
ZP_01895818  358 ksEGAKLMTGGGHAkgedlaDGYFIEPTVFDEVthdmTIAREEIFGPVMSILVWDdEASMMEQVNGVEYGLCANVWTNDI 437 Marinobacter al...
Feature 1                                                                    
BAA23265     426 TRAHLIARrVEAGYVLVNGGs-RHYWGLPFGGVKSSGVGSEESMEELISYTETKTTTVVL 484 Nocardioides sp.
YP_001072474 438 TTAVSVADrLDTGYVWINGSg-SHFLGAPFGGHKNSGTGTEEGVEELESYLQTKTVNIPL 496 Mycobacterium sp. JLS
YP_001116748 437 STAHRAASrVEAGYVWINQTs-RHYLGVPFGGVKHSGLGREECLEELLDFTATKSINIQL 495 Burkholderia vietnamiensis G4
YP_718191    433 DAACRTALaVEAGFVWINEVs-KHYLGAPYGGVKQSGIGREECLDELISFTQEKNIHIRI 491 Sphingomonas sp. KA1
ZP_01226527  432 HQAHLTAReVEAGYVWINDVs-KHFLGAPFGGVKQSGLGREECLEELLAYTREKNVHLRL 490 Aurantimonas sp. SI85-9A1
YP_786425    432 ARAHRLAReIDAGFVWINEVg-KHFLGAPYGGVRQSGIGRDECFGEMLSFTREKNVHVNL 490 Bordetella avium 197N
YP_760915    427 ARAHRIISrVEAGFCWINDVa-RHALGSPFGGYKQSGIGREECLEELLSFTQEKNVWINL 485 Hyphomonas neptunium ATCC 15444
YP_951372    418 SQAHRMAAgLDAGYVWINGSs-RHYWGLPFGGWKSSGVGSEESTEELLSYTQVKAVTVTL 476 Mycobacterium vanbaalenii PYR-1
YP_368612    425 RQALNTARrIRAGSVFVNGSn-THFLGVPWGGFKNSGVDREEGIEEMYSYVEKKVINVML 483 Burkholderia sp. 383
YP_608184    425 QQAFDTARrVRAGSVFINGSn-THFLGVPWGGFKNSGVDREEGIEELYSYVEKKVINVML 483 Pseudomonas entomophila L48
ZP_01895818  438 STALRVGDdIEAGYVWINGHggKRFKGAPFGGVKNSGIGREHDTSEIRSFTQEKNINVRY 497 Marinobacter algicola DG893

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